RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 MS4A4EQ96PG1 132 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 OR7D2Q96RA2 312 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 CCNL2Q96S94 520 aaPredicted RBP15.29■□□□□ 0.04
SHOX-201ENST00000334060 KAT8Q9H7Z6 458 aaKnown RBP15.29■□□□□ 0.04
SHOX-201ENST00000334060 ZBTB20Q9HC78 741 aaPredicted RBP15.29■□□□□ 0.04
SHOX-201ENST00000334060 FLRT3Q9NZU0 649 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 PTGFRNQ9P2B2 879 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 A0A087WV62 115 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 NPIPA5A0A0B4J1W7 369 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 A0A1W2PQ72 361 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 DPPA5A6NC42 116 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 A8MUI8 341 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 NPIPA7E9PJI5 369 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 DNAJA2O60884 412 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 NPIPA8P0DM63 369 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 MATN1P21941 496 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 MAP3K8P41279 467 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 RNF4P78317 190 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 SYPL1Q16563 259 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 DEFB109BQ30KR1 87 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 DCAF10Q5QP82 559 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 ZNF468Q5VIY5 522 aaPredicted RBP15.29■□□□□ 0.04
SHOX-201ENST00000334060 FIGNL1Q6PIW4 674 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 RNF111Q6ZNA4 994 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 PCYOX1LQ8NBM8 494 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 BRIX1Q8TDN6 353 aaKnown RBP15.29■□□□□ 0.04
SHOX-201ENST00000334060 DNAJC9Q8WXX5 260 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 WWTR1Q9GZV5 400 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 QRSL1Q9H0R6 528 aaKnown RBP15.29■□□□□ 0.04
SHOX-201ENST00000334060 RUBCNLQ9H714 662 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 ANKRD10Q9NXR5 420 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 ADA2Q9NZK5 511 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 C19orf25Q9UFG5 118 aaPredicted RBP15.29■□□□□ 0.04
SHOX-201ENST00000334060 PPIEQ9UNP9 301 aaKnown RBP15.29■□□□□ 0.04
SHOX-201ENST00000334060 SSUH2Q9Y2M2 353 aa15.29■□□□□ 0.04
SHOX-201ENST00000334060 ACACBO00763 2458 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 CACNA1GO43497 2377 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 NCK1P16333 377 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 GALNSP34059 522 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 CDC20Q12834 499 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 HPS6Q86YV9 775 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 PGAM4Q8N0Y7 254 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 ANKFN1Q8N957 763 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 MORN4Q8NDC4 146 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 MIPOL1Q8TD10 442 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 XAGE5Q8WWM1 108 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 ROPN1LQ96C74 230 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 ZG16BQ96DA0 208 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 PCDHAC1Q9H158 963 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 TMEM181Q9P2C4 612 aa15.28■□□□□ 0.04
SHOX-201ENST00000334060 MAP1BP46821 2468 aaKnown RBP15.27■□□□□ 0.04
SHOX-201ENST00000334060 TNFRSF21O75509 655 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 AQP1P29972 269 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 GABRA3P34903 492 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 NR0B1P51843 470 aaKnown RBP15.27■□□□□ 0.04
SHOX-201ENST00000334060 LIPEQ05469 1076 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 KPNB1Q14974 876 aaKnown RBP15.27■□□□□ 0.04
SHOX-201ENST00000334060 LRRC23Q53EV4 343 aaPredicted RBP15.27■□□□□ 0.04
SHOX-201ENST00000334060 PLAG1Q6DJT9 500 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 HACD2Q6Y1H2 254 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 ZNF441Q8N8Z8 693 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 OR56A1Q8NGH5 318 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 OR52N2Q8NGI0 321 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 FAM81AQ8TBF8 368 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 SFXN5Q8TD22 340 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 THTPAQ9BU02 230 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 C3orf14Q9HBI5 128 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 MRGBPQ9NV56 204 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 CHCHD3Q9NX63 227 aaKnown RBP15.27■□□□□ 0.04
SHOX-201ENST00000334060 ABCD2Q9UBJ2 740 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 EGFL7Q9UHF1 273 aa15.27■□□□□ 0.04
SHOX-201ENST00000334060 FCMRO60667 390 aa15.27■□□□□ 0.03
SHOX-201ENST00000334060 PRAMEF2O60811 474 aa15.27■□□□□ 0.03
SHOX-201ENST00000334060 GCM2O75603 506 aaPredicted RBP15.27■□□□□ 0.03
SHOX-201ENST00000334060 HPP00738 406 aa15.27■□□□□ 0.03
SHOX-201ENST00000334060 ALPPP05187 535 aa15.27■□□□□ 0.03
SHOX-201ENST00000334060 GPX2P18283 190 aa15.27■□□□□ 0.03
SHOX-201ENST00000334060 VHLP40337 213 aa15.27■□□□□ 0.03
SHOX-201ENST00000334060 GSK3BP49841 420 aa15.27■□□□□ 0.03
SHOX-201ENST00000334060 PRR5P85299 388 aa15.27■□□□□ 0.03
SHOX-201ENST00000334060 PROSER1Q86XN7 944 aa15.27■□□□□ 0.03
SHOX-201ENST00000334060 NATD1Q8N6N6 113 aa15.27■□□□□ 0.03
SHOX-201ENST00000334060 OR10Q1Q8NGQ4 319 aa15.27■□□□□ 0.03
SHOX-201ENST00000334060 CCDC124Q96CT7 223 aaKnown RBP15.27■□□□□ 0.03
SHOX-201ENST00000334060 RMND5BQ96G75 393 aaPredicted RBP15.27■□□□□ 0.03
SHOX-201ENST00000334060 THOC3Q96J01 351 aaKnown RBP15.27■□□□□ 0.03
SHOX-201ENST00000334060 PELOQ9BRX2 385 aaKnown RBP15.27■□□□□ 0.03
SHOX-201ENST00000334060 BTBD10Q9BSF8 475 aa15.27■□□□□ 0.03
SHOX-201ENST00000334060 GID8Q9NWU2 228 aa15.27■□□□□ 0.03
SHOX-201ENST00000334060 DKK4Q9UBT3 224 aa15.27■□□□□ 0.03
SHOX-201ENST00000334060 MAGEA13PA6NCF6 341 aa15.26■□□□□ 0.03
SHOX-201ENST00000334060 GYG2O15488 501 aa15.26■□□□□ 0.03
SHOX-201ENST00000334060 GSC2O15499 205 aa15.26■□□□□ 0.03
SHOX-201ENST00000334060 OR2J2O76002 312 aa15.26■□□□□ 0.03
SHOX-201ENST00000334060 NADKO95544 446 aaPredicted RBP15.26■□□□□ 0.03
SHOX-201ENST00000334060 CHRM4P08173 479 aa15.26■□□□□ 0.03
SHOX-201ENST00000334060 CRYBA2P53672 197 aa15.26■□□□□ 0.03
SHOX-201ENST00000334060 MS4A2Q01362 244 aa15.26■□□□□ 0.03
SHOX-201ENST00000334060 HSDL2Q6YN16 418 aa15.26■□□□□ 0.03
SHOX-201ENST00000334060 CALHM3Q86XJ0 350 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms