RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 LDB3O75112 727 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 SUPT3HO75486 399 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 C2P06681 752 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 ABHD2P08910 425 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 SLC35E2BP0CK96 405 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 CADP27708 2225 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 GSTM2P28161 218 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 CLDN18P56856 261 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 FBXW4P57775 412 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 FGFBP1Q14512 234 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 ACAP2Q15057 778 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 RBBP5Q15291 538 aaKnown RBP13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 HIST2H2ACQ16777 129 aaPredicted RBP13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 HIST2H2AA3Q6FI13 130 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 TREML4Q6UXN2 200 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 TMPRSS11BQ86T26 416 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 DTX2Q86UW9 622 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 KLHDC8AQ8IYD2 350 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 BANPQ8N9N5 519 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 OR14L1PQ8NHC6 308 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 FAM168AQ92567 244 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 EXT2Q93063 718 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 GAL3ST3Q96A11 431 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 ADAD1Q96M93 576 aaKnown RBP13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 OR4K3Q96R72 315 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 PAFAH2Q99487 392 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 VPS11Q9H270 941 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 SNX15Q9NRS6 342 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 ZNF180Q9UJW8 692 aa13.26□□□□□ -0.29
CTHRC1-201ENST00000330295 CAPN14A8MX76 684 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 CD3EP07766 207 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 C1GALT1C1LP0DN25 315 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 COX7A2P14406 83 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 ZNF708P17019 499 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 ECHS1P30084 290 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 GGT5P36269 586 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 SRP14P37108 136 aaKnown RBP13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 CASP3P42574 277 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 LIM2P55344 173 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 GFRA1P56159 465 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 STXBP1P61764 594 aaKnown RBP13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 REEP5Q00765 189 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 RCN2Q14257 317 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 OR4D1Q15615 310 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 PDK4Q16654 411 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 PAGE2BQ5JRK9 111 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 TEX35Q5T0J7 233 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 TMEM64Q6YI46 380 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 STAC2Q6ZMT1 411 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 SLC29A4Q7RTT9 530 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 ISCA2Q86U28 154 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 TAGAPQ8N103 731 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 PDPRQ8NCN5 879 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 RHEBL1Q8TAI7 183 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 UHMK1Q8TAS1 419 aaKnown RBP13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 C10orf105Q8TEF2 133 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 TACO1Q9BSH4 297 aaKnown RBP13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 ACTR6Q9GZN1 396 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 WWTR1Q9GZV5 400 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 DAPP1Q9UN19 280 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 ANGPTL3Q9Y5C1 460 aa13.25□□□□□ -0.29
CTHRC1-201ENST00000330295 A0A088AWK7 358 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 HRKO00198 91 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 ERI3O43414 337 aaKnown RBP13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 CCNT2O60583 730 aaKnown RBP13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 KLHL2O95198 593 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 FESP07332 822 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 SNRPAP09012 282 aaKnown RBP13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 RBP1P09455 135 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 COL6A2P12110 1019 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 GFAPP14136 432 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 ZNF10P21506 573 aaPredicted RBP13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 GDF5P43026 501 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 HSPA7P48741 367 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 IRX1P78414 480 aaPredicted RBP13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 ID2Q02363 134 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 PCDH1Q08174 1060 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 LAPTM5Q13571 262 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 TSNAXIP1Q2TAA8 658 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 NCMAPQ5T1S8 102 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 ALKBH2Q6NS38 261 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 ANGPTL8Q6UXH0 198 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 TMIGD1Q6UXZ0 262 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 LRRC70Q7Z2Q7 622 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 IFNEQ86WN2 208 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 KBTBD8Q8NFY9 601 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 KCTD4Q8WVF5 259 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 KAT2AQ92830 837 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 UBE2E3Q969T4 207 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 NXNL1Q96CM4 212 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 MTBPQ96DY7 904 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 EFCAB11Q9BUY7 163 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 CD244Q9BZW8 370 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 OR2B2Q9GZK3 357 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 EHD1Q9H4M9 534 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 FAIMQ9NVQ4 179 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 OPTCQ9UBM4 332 aa13.24□□□□□ -0.29
CTHRC1-201ENST00000330295 TMCO1Q9UM00 188 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms