RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 PTGES3Q15185 160 aaKnown RBP18.04■□□□□ 0.48
CHMP6-201ENST00000325167 WDR45BQ5MNZ6 344 aa18.04■□□□□ 0.48
CHMP6-201ENST00000325167 EXOSC6Q5RKV6 272 aaKnown RBP18.04■□□□□ 0.48
CHMP6-201ENST00000325167 ZNF438Q7Z4V0 828 aa18.04■□□□□ 0.48
CHMP6-201ENST00000325167 ARHGEF39Q8N4T4 335 aa18.04■□□□□ 0.48
CHMP6-201ENST00000325167 PRSS33Q8NF86 280 aa18.04■□□□□ 0.48
CHMP6-201ENST00000325167 OR6T1Q8NGN1 323 aa18.04■□□□□ 0.48
CHMP6-201ENST00000325167 TRUB1Q8WWH5 349 aaKnown RBP18.04■□□□□ 0.48
CHMP6-201ENST00000325167 DNASE2BQ8WZ79 361 aa18.04■□□□□ 0.48
CHMP6-201ENST00000325167 SLC9A6Q92581 669 aa18.04■□□□□ 0.48
CHMP6-201ENST00000325167 SLC38A4Q969I6 547 aa18.04■□□□□ 0.48
CHMP6-201ENST00000325167 ZDHHC12Q96GR4 267 aa18.04■□□□□ 0.48
CHMP6-201ENST00000325167 COG8Q96MW5 612 aa18.04■□□□□ 0.48
CHMP6-201ENST00000325167 ZNF285Q96NJ3 590 aa18.04■□□□□ 0.48
CHMP6-201ENST00000325167 GPN2Q9H9Y4 310 aaPredicted RBP18.04■□□□□ 0.48
CHMP6-201ENST00000325167 TBC1D17Q9HA65 648 aa18.04■□□□□ 0.48
CHMP6-201ENST00000325167 FAM60AQ9NP50 221 aa18.04■□□□□ 0.48
CHMP6-201ENST00000325167 ERVK-18Q9QC07 812 aa18.04■□□□□ 0.48
CHMP6-201ENST00000325167 HYKKA2RU49 373 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 CCNA2P20248 432 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 CHMP24386 653 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 CTSKP43235 329 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 EMP3P54852 163 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 EMX1Q04741 257 aaPredicted RBP18.03■□□□□ 0.48
CHMP6-201ENST00000325167 ST3GAL3Q11203 375 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 TRAM2Q15035 370 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 C14orf28Q4W4Y0 310 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 PGBD2Q6P3X8 592 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 RBM45Q8IUH3 476 aaKnown RBP18.03■□□□□ 0.48
CHMP6-201ENST00000325167 LACC1Q8IV20 430 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 OR4N5Q8IXE1 308 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 ZNF595Q8IYB9 648 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 DEFB119Q8N690 84 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 SLC16A11Q8NCK7 471 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 OR6C4Q8NGE1 309 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 SLC7A13Q8TCU3 470 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 FAR1Q8WVX9 515 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 OTUB1Q96FW1 271 aaPredicted RBP18.03■□□□□ 0.48
CHMP6-201ENST00000325167 Q96MT0 163 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 RSPO3Q9BXY4 272 aaPredicted RBP18.03■□□□□ 0.48
CHMP6-201ENST00000325167 WARS2Q9UGM6 360 aaKnown RBP18.03■□□□□ 0.48
CHMP6-201ENST00000325167 NDOR1Q9UHB4 597 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 PSORS1C1Q9UIG5 152 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 PCDHGA10Q9Y5H3 936 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 CLCA1A8K7I4 914 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 SGK494L7N484 410 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 AP3D1O14617 1153 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 SEMA7AO75326 666 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 NSA2O95478 260 aaKnown RBP18.03■□□□□ 0.48
CHMP6-201ENST00000325167 GUSBP08236 651 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 POU2F1P14859 743 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 PCSK6P29122 969 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 AVPR2P30518 371 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 CXCL12P48061 93 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 TAS2R41P59536 307 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 SNRPNP63162 240 aaKnown RBP18.03■□□□□ 0.48
CHMP6-201ENST00000325167 NHLH1Q02575 133 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 DUSP8Q13202 625 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 BIKQ13323 160 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 PIN1Q13526 163 aaPredicted RBP18.03■□□□□ 0.48
CHMP6-201ENST00000325167 PRICKLE4Q2TBC4 344 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 INAVAQ3KP66 663 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 SYT6Q5T7P8 510 aaPredicted RBP18.03■□□□□ 0.48
CHMP6-201ENST00000325167 FRRS1Q6ZNA5 592 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 PRSS41Q7RTY9 318 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 C1orf216Q8TAB5 229 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 SGCDQ92629 289 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 CDS1Q92903 461 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 COPS4Q9BT78 406 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 ARMC7Q9H6L4 198 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 CLN6Q9NWW5 311 aa18.03■□□□□ 0.48
CHMP6-201ENST00000325167 CHST10O43529 356 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 RDH16O75452 317 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 STX11O75558 287 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 EPPINO95925 133 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 CCNYL3P0C7X3 344 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 ACP2P11117 423 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 GABRB1P18505 474 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 MLLT3P42568 568 aaPredicted RBP18.02■□□□□ 0.47
CHMP6-201ENST00000325167 ST13P50502 369 aaKnown RBP18.02■□□□□ 0.47
CHMP6-201ENST00000325167 PDX1P52945 283 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 TARDBPQ13148 414 aaKnown RBP eCLIP18.02■□□□□ 0.47
CHMP6-201ENST00000325167 SEC23BQ15437 767 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 SLX4IPQ5VYV7 408 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 PODNL1Q6PEZ8 512 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 ANKRD13BQ86YJ7 626 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 ZNF619Q8N2I2 560 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 C7orf57Q8NEG2 295 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 OR5T3Q8NGG3 340 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 CTHRC1Q96CG8 243 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 SIGLEC11Q96RL6 698 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 MAP3K3Q99759 626 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 ZNF350Q9GZX5 532 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 SAP130Q9H0E3 1048 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 PDE7BQ9NP56 450 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 FKBP14Q9NWM8 211 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 ZNF226Q9NYT6 803 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 MAT2BQ9NZL9 334 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 REV1Q9UBZ9 1251 aa18.02■□□□□ 0.47
CHMP6-201ENST00000325167 ZNF443Q9Y2A4 671 aaPredicted RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms