RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ACY1Q03154 408 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 DBPQ10586 325 aaPredicted RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 KCNN1Q92952 543 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 FAM163AQ96GL9 167 aaPredicted RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 UGT2A1Q9Y4X1 527 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 CACNG2Q9Y698 323 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 DYSFO75923 2080 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 TCRBV21S2A2A0A5A6 115 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 CD6P30203 668 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 LEG1Q6P5S2 330 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 C15orf40Q8WUR7 153 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 ZUFSPQ96AP4 578 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 SLC22A18Q96BI1 424 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 CDKN2AIPNLQ96HQ2 116 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 SAMD8Q96LT4 415 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 DUSP11O75319 330 aaKnown RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 HOXD8P13378 290 aaPredicted RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 G0S2P27469 103 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 STK19P49842 368 aaPredicted RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 DPYSL2Q16555 572 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 GID4Q8IVV7 300 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 OR4N5Q8IXE1 308 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 CCDC106Q9BWC9 280 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 TCEAL2Q9H3H9 227 aaPredicted RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 RPH3ALQ9UNE2 315 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 PTPRQQ9UMZ3 2332 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 SIX6O95475 246 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 OTX2P32243 289 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 KCNC1P48547 511 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 UBE2KP61086 200 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 PLP2Q04941 152 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 GAB1Q13480 694 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 RSU1Q15404 277 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 C11orf84Q9BUA3 381 aaPredicted RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 CCDC32Q9BV29 185 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 KCMF1Q9P0J7 381 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 MAFBQ9Y5Q3 323 aaPredicted RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 TRAV18A0A075B6X5 111 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 HTR3BO95264 441 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 KLF8O95600 359 aaPredicted RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 PFKLP17858 780 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 IL32P24001 234 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 MLC1Q15049 377 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 FAM110CQ1W6H9 321 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 DPY19L1Q2PZI1 675 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 INAVAQ3KP66 663 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 AWAT2Q6E213 333 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 SLC9B2Q86UD5 537 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 SNIP1Q8TAD8 396 aaKnown RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 INPP5KQ9BT40 448 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 MYNNQ9NPC7 610 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 PPP1R14DQ9NXH3 145 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 NAALAD2Q9Y3Q0 740 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 FAM230AA0A1W2PPH8 454 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 PPP1R3DO95685 299 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 AGR2O95994 175 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 MGST1P10620 155 aaKnown RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 UQCRC2P22695 453 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 SCAPQ12770 1279 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 AGTRAPQ6RW13 159 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 TMIGD1Q6UXZ0 262 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 SPRYD4Q8WW59 207 aaPredicted RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 HHIPL1Q96JK4 782 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 MYRFLQ96LU7 910 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 RBP7Q96R05 134 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 ZNF696Q9H7X3 374 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 ZNF821O75541 412 aaPredicted RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 PTTG1O95997 202 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 PTCHD3Q3KNS1 767 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 TANGO2Q6ICL3 276 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 GKN2Q86XP6 184 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 USB1Q9BQ65 265 aaKnown RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 ALG8Q9BVK2 526 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 SERTAD3Q9UJW9 196 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 TSPAN6O43657 245 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 F3P13726 295 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 JUPP14923 745 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 UNC50Q53HI1 259 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 C22orf39Q6P5X5 142 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 TMEM205Q6UW68 189 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 OR4C15Q8NGM1 316 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 SORCS1Q8WY21 1168 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 ARHGAP23Q9P227 1491 aa7.52□□□□□ -1.2
CIITA-201ENST00000324288 LAMA4Q16363 1823 aa7.52□□□□□ -1.2
CIITA-201ENST00000324288 A0A1W2PP55 124 aa7.52□□□□□ -1.2
CIITA-201ENST00000324288 A0A1W2PQ09 198 aa7.52□□□□□ -1.2
CIITA-201ENST00000324288 MPIG6BO95866 241 aa7.52□□□□□ -1.2
CIITA-201ENST00000324288 ASGR2P07307 311 aa7.52□□□□□ -1.2
CIITA-201ENST00000324288 FRKP42685 505 aaPredicted RBP7.52□□□□□ -1.2
CIITA-201ENST00000324288 PLCXD2Q0VAA5 305 aa7.52□□□□□ -1.2
CIITA-201ENST00000324288 SLC9A3R2Q15599 337 aa7.52□□□□□ -1.2
CIITA-201ENST00000324288 HS3ST5Q8IZT8 346 aa7.52□□□□□ -1.2
CIITA-201ENST00000324288 DNAJC5GQ8N7S2 189 aa7.52□□□□□ -1.2
CIITA-201ENST00000324288 OR7G1Q8NGA0 311 aa7.52□□□□□ -1.2
CIITA-201ENST00000324288 ZNF419Q96HQ0 510 aaPredicted RBP7.52□□□□□ -1.2
CIITA-201ENST00000324288 ZNF436Q9C0F3 470 aaPredicted RBP7.52□□□□□ -1.2
CIITA-201ENST00000324288 SDHDO14521 159 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 UPK1BO75841 260 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 CAV2P51636 162 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 EMX2Q04743 252 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms