RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 TMEM151AQ8N4L1 468 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 RELL2Q8NC24 303 aaPredicted RBP7.43□□□□□ -1.22
TPM3-203ENST00000312970 NAXEQ8NCW5 288 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 ADCY4Q8NFM4 1077 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 GOT1L1Q8NHS2 421 aaPredicted RBP7.43□□□□□ -1.22
TPM3-203ENST00000312970 ZPLD1Q8TCW7 415 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 FAM222BQ8WU58 562 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 RNASE6Q93091 150 aaKnown RBP7.43□□□□□ -1.22
TPM3-203ENST00000312970 HGDQ93099 445 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 CTHRC1Q96CG8 243 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 KLHL29Q96CT2 875 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 OMA1Q96E52 524 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 WDYHV1Q96HA8 205 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 TRIB1Q96RU8 372 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 FMO2Q99518 471 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 SH3GL2Q99962 352 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 FAIM2Q9BWQ8 316 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 C1QTNF3Q9BXJ4 246 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 UGT2B28Q9BY64 529 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 RASSF1Q9NS23 344 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 MAT2BQ9NZL9 334 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 CRIM1Q9NZV1 1036 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 VPS29Q9UBQ0 182 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 PRODH2Q9UF12 536 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 TRPS1Q9UHF7 1281 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 EXO1Q9UQ84 846 aaKnown RBP7.43□□□□□ -1.22
TPM3-203ENST00000312970 DTX4Q9Y2E6 619 aa7.43□□□□□ -1.22
TPM3-203ENST00000312970 MBD3L4A6NDZ8 208 aaPredicted RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 MBD3L3A6NE82 208 aaPredicted RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 TUBAL3A6NHL2 446 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 MBD3L5A6NJ08 208 aaPredicted RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 A6NNC1 897 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 A8MT66 165 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 KDM4EB2RXH2 506 aaPredicted RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 MANBAO00462 879 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 TO15178 435 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 ULK1O75385 1050 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 SUPT7LO94864 414 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 OR4F21O95013 312 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 ESRRBO95718 433 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 CBX7O95931 251 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 IL18BPO95998 194 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 KRT6AP02538 564 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 KRT6BP04259 564 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 RHOXF2BP0C7M4 288 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 EPXP11678 715 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 HSD3B1P14060 373 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 CD99P14209 185 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 DRD2P14416 443 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 TAC1P20366 129 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 OPRM1P35372 400 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 GCKP35557 465 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 SOX18P35713 384 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 KRT6CP48668 564 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 ALDH9A1P49189 494 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 EMDP50402 254 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 ZNF136P52737 540 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 WNT3P56703 355 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 PLCXD2Q0VAA5 305 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 RCAN2Q14206 197 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 DAZAP2Q15038 168 aaPredicted RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 RASA2Q15283 850 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 NNATQ16517 81 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 GFOD2Q3B7J2 385 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 YRDCQ86U90 279 aaKnown RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 SAMD14Q8IZD0 417 aaPredicted RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 C1orf52Q8N6N3 182 aaKnown RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 CDYL2Q8N8U2 506 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 WDSUB1Q8N9V3 476 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 SIMC1Q8NDZ2 872 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 CHDHQ8NE62 594 aaPredicted RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 FAM83FQ8NEG4 500 aaPredicted RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 MNS1Q8NEH6 495 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 OR52R1Q8NGF1 315 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 SVIPQ8NHG7 77 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 MBD3L2Q8NHZ7 208 aaPredicted RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 UHMK1Q8TAS1 419 aaKnown RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 METTL6Q8TCB7 284 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 TMCO6Q96DC7 493 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 ERP27Q96DN0 273 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 CNRIP1Q96F85 164 aaPredicted RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 ZNF681Q96N22 645 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 NODALQ96S42 347 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 FOXC2Q99958 501 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 GPATCH1Q9BRR8 931 aaKnown RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 OSBPL11Q9BXB4 747 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 ITPAQ9BY32 194 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 CXXC4Q9H2H0 198 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 CLEC4MQ9H2X3 399 aaPredicted RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 LIME1Q9H400 295 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 PPCSQ9HAB8 311 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 CCM2LQ9NUG4 571 aaPredicted RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 KLRF1Q9NZS2 232 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 ST6GALNAC2Q9UJ37 374 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 ZNF225Q9UK10 706 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 UTS2RQ9UKP6 389 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 GPR55Q9Y2T6 319 aaPredicted RBP7.42□□□□□ -1.22
TPM3-203ENST00000312970 PLLPQ9Y342 182 aa7.42□□□□□ -1.22
TPM3-203ENST00000312970 EXOC1LA0A1B0GW35 172 aa7.41□□□□□ -1.22
TPM3-203ENST00000312970 FRG2CA6NGY1 282 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms