RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 IGDCC3Q8IVU1 814 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 OR6C4Q8NGE1 309 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 TDP1Q9NUW8 608 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 RNF212BA8MTL3 300 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 MYCLP1P12525 358 aaPredicted RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 CD1EP15812 388 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 CA5AP35218 305 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 GATMP50440 423 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 HERV-K104P61576 105 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 SYPL2Q5VXT5 272 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 BPIFB1Q8TDL5 484 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 C5orf34Q96MH7 638 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 SERINC2Q96SA4 455 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 PFDN5Q99471 154 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 NAA11Q9BSU3 229 aaPredicted RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 POLDIP3Q9BY77 421 aaKnown RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 LUZP4Q9P127 313 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 WRAP73Q9P2S5 460 aaPredicted RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 RGS17Q9UGC6 210 aaPredicted RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 CLEC4AQ9UMR7 237 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 DHDHQ9UQ10 334 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 SOX15O60248 233 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 CSTBP04080 98 aaKnown RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 LMO2P25791 158 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 CERS1P27544 350 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 TRIM23P36406 574 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 GCGRP47871 477 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 RIDAP52758 137 aaKnown RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 SH3BP2P78314 561 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 L3MBTL4Q8NA19 623 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 LRR1Q96L50 414 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 C1QTNF2Q9BXJ5 285 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 D6RAR5 112 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 TSTD3H0UI37 97 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 I6L893 689 aaPredicted RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 TSPAN4O14817 238 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 NDUFS4O43181 175 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 GPR137BO60478 399 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 RAD51DO75771 328 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 GABBR2O75899 941 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 OR2T7P0C7T2 308 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 AKAIN1P0CW23 69 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 EDNRAP25101 427 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 HOXA9P31269 272 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 PRSS3P35030 304 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 PGDP52209 483 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 GINS1Q14691 196 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 MAMDC2Q7Z304 686 aaPredicted RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 OR2T27Q8NH04 317 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 OR51J1Q9H342 316 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 SRA1Q9HD15 236 aaKnown RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 CACNG2Q9Y698 323 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 TMX2-CTNND1H3BSU7 103 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 NDUFB2O95178 105 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 LGI1O95970 557 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 CR2P20023 1033 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 BAMBIQ13145 260 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 GPR148Q8TDV2 347 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 FBXL20Q96IG2 436 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 PWWP2AQ96N64 755 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 SEMA4GQ9NTN9 838 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 FBXO7Q9Y3I1 522 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 NME7Q9Y5B8 376 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 ANAPC1Q9H1A4 1944 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 IMPA2O14732 288 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 PQBP1O60828 265 aaKnown RBP8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF41P51814 821 aaPredicted RBP8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ACTR1AP61163 376 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 RRAS2P62070 204 aaPredicted RBP8.37□□□□□ -1.07
COL6A5-202ENST00000312481 MEP1AQ16819 746 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 YIF1BQ5BJH7 314 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 WDTC1Q8N5D0 677 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 TCEANCQ8N8B7 351 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF565Q8N9K5 539 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 OR2L3Q8NG85 312 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 OR7D4Q8NG98 312 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 OR6T1Q8NGN1 323 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 OR5J2Q8NH18 312 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 COQ10AQ96MF6 247 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 BPIFA1Q9NP55 256 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 SLC7A11Q9UPY5 501 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 IGLV3-10A0A075B6K4 115 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 A0A1W2PQL4 384 aaPredicted RBP8.37□□□□□ -1.07
COL6A5-202ENST00000312481 GLTPD2A6NH11 291 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 LOC730098B7Z3J9 87 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 GNSP15586 552 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 CD83Q01151 205 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 PEA15Q15121 130 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 CHRNA6Q15825 494 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 SLC2A7Q6PXP3 512 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 HASPINQ8TF76 798 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 CHAC2Q8WUX2 184 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 FCRL1Q96LA6 429 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 FEVQ99581 238 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 DOK1Q99704 481 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 C16orf70Q9BSU1 422 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 SLC17A5Q9NRA2 495 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 VAPAQ9P0L0 249 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 GMEB2Q9UKD1 530 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms