RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 SHISA5Q8N114 240 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 TEX47Q8TBZ9 253 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 FGF13Q92913 245 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 COL26A1Q96A83 441 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 EFHD2Q96C19 240 aaPredicted RBP23.79■■□□□ 1.4
HOXB3-201ENST00000311626 ADAM29Q9UKF5 820 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 ZFR2Q9UPR6 939 aaKnown RBP23.79■■□□□ 1.4
HOXB3-201ENST00000311626 MDC1Q14676 2089 aaKnown RBP23.79■■□□□ 1.4
HOXB3-201ENST00000311626 SLC2A10O95528 541 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 CPEP16870 476 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 WNT4P56705 351 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 FABP5Q01469 135 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 GPR50Q13585 617 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 BCL2A1Q16548 175 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 C6orf132Q5T0Z8 1188 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 ABHD17CQ6PCB6 329 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 GDPGP1Q6ZNW5 385 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 ANKK1Q8NFD2 765 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 OR6F1Q8NGZ6 308 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 SLC6A17Q9H1V8 727 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 NT5DC2Q9H857 520 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 APOBEC3BQ9UH17 382 aaKnown RBP23.79■■□□□ 1.4
HOXB3-201ENST00000311626 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.79■■□□□ 1.4
HOXB3-201ENST00000311626 N6AMT1Q9Y5N5 214 aa23.79■■□□□ 1.4
HOXB3-201ENST00000311626 PIP5K1CO60331 668 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 ZIC2O95409 532 aaPredicted RBP23.78■■□□□ 1.4
HOXB3-201ENST00000311626 MLC1Q15049 377 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 ENTPD8Q5MY95 495 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 PSRC1Q6PGN9 363 aaPredicted RBP23.78■■□□□ 1.4
HOXB3-201ENST00000311626 BBS1Q8NFJ9 593 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 OR52P1PQ8NH57 321 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 TMEM163Q8TC26 289 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 TMCO6Q96DC7 493 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 PHOX2BQ99453 314 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 SLC38A1Q9H2H9 487 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 CERS4Q9HA82 394 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 COMMD3Q9UBI1 195 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 TRBV23OR9-2A0A075B6M9 112 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 LINC01553A4QN01 128 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 FABP12A6NFH5 140 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 TMCC2O75069 709 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 PEBP1P30086 187 aaKnown RBP23.78■■□□□ 1.4
HOXB3-201ENST00000311626 TANGO2Q6ICL3 276 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 SLC27A4Q6P1M0 643 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 NUP43Q8NFH3 380 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 BEX2Q9BXY8 128 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 ZNF221Q9UK13 617 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 ENTPD4Q9Y227 616 aa23.78■■□□□ 1.4
HOXB3-201ENST00000311626 MTNR1AP48039 350 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 OR4N5Q8IXE1 308 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 KCT2Q8NC54 265 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 NLGN4YQ8NFZ3 816 aaPredicted RBP23.77■■□□□ 1.4
HOXB3-201ENST00000311626 GANCQ8TET4 914 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 ZFPM2Q8WW38 1151 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 TMED9Q9BVK6 235 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 TEX101Q9BY14 249 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 TBC1D17Q9HA65 648 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 DNMT3AQ9Y6K1 912 aaPredicted RBP23.77■■□□□ 1.4
HOXB3-201ENST00000311626 NR2F6P10588 404 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 ACP2P11117 423 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 DDX5P17844 614 aaKnown RBP23.77■■□□□ 1.4
HOXB3-201ENST00000311626 LRRC32Q14392 662 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 ZIC1Q15915 447 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 PYDC2Q56P42 97 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 KATNB1Q9BVA0 655 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 HDHD5Q9BXW7 423 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 BCL2L10Q9HD36 194 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 SLC13A4Q9UKG4 626 aa23.77■■□□□ 1.4
HOXB3-201ENST00000311626 CSF3P09919 207 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 LIMS3P0CW19 117 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 LIMS4P0CW20 117 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 ZNF791Q3KP31 576 aaPredicted RBP23.76■■□□□ 1.39
HOXB3-201ENST00000311626 CD300LDQ6UXZ3 194 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 GLCCI1Q86VQ1 547 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 OR4Q3Q8NH05 313 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 ACSL5Q9ULC5 683 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 DVL2O14641 736 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 UBXN7O94888 489 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 PDX1P52945 283 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 BTN3A2P78410 334 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 CST6Q15828 149 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 GLYR1Q49A26 553 aaPredicted RBP23.76■■□□□ 1.39
HOXB3-201ENST00000311626 C6orf183Q5T699 404 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 SLC36A4Q6YBV0 504 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 RRM2BQ7LG56 351 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 RAB43Q86YS6 212 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 RAB42Q8N4Z0 105 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 SMARCD2Q92925 531 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 KCTD7Q96MP8 289 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 SPATA5L1Q9BVQ7 753 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 PINK1Q9BXM7 581 aa23.76■■□□□ 1.39
HOXB3-201ENST00000311626 C11orf54Q9H0W9 315 aaPredicted RBP23.76■■□□□ 1.39
HOXB3-201ENST00000311626 SF3B6Q9Y3B4 125 aaKnown RBP23.76■■□□□ 1.39
HOXB3-201ENST00000311626 MUC22E2RYF6 1773 aaPredicted RBP23.76■■□□□ 1.39
HOXB3-201ENST00000311626 PRODHO43272 600 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 ALPPP05187 535 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 PKLRP30613 574 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 SEC13P55735 322 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 KLHL22Q53GT1 634 aa23.75■■□□□ 1.39
HOXB3-201ENST00000311626 ZNF544Q6NX49 715 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms