RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 NRROSQ86YC3 692 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 PARP16Q8N5Y8 322 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 PRRC1Q96M27 445 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 SLC6A18Q96N87 628 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 ZSCAN32Q9NX65 697 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 GIN1Q9NXP7 522 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 SPIN1Q9Y657 262 aaPredicted RBP10.84□□□□□ -0.67
PTPN2-201ENST00000309660 SPEGQ15772 3267 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 DSPPQ9NZW4 1301 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 AP3D1O14617 1153 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 MYL12AP19105 171 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 HYAL1Q12794 435 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 B3GLCTQ6Y288 498 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 FAM92BQ6ZTR7 304 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 PRICKLE2Q7Z3G6 844 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 NKAIN4Q8IVV8 208 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 CADM3Q8N126 398 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 OR7G2Q8NG99 324 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 SLC38A1Q9H2H9 487 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 RMI1Q9H9A7 625 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 HHATLQ9HCP6 504 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 STARD5Q9NSY2 213 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 SEMA4GQ9NTN9 838 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 ANKMY1Q9P2S6 941 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 YARS2Q9Y2Z4 477 aaKnown RBP10.83□□□□□ -0.67
PTPN2-201ENST00000309660 PCDHGA3Q9Y5H0 932 aa10.83□□□□□ -0.67
PTPN2-201ENST00000309660 A0A1W2PQF6 199 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 ARRDC5A6NEK1 342 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 HBQ1P09105 142 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 TRHRP34981 398 aaPredicted RBP10.83□□□□□ -0.68
PTPN2-201ENST00000309660 RAB15P59190 212 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 IRF3Q14653 427 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 SYT14P1Q58G82 188 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 PRSS41Q7RTY9 318 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 KIAA1958Q8N8K9 716 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 MFSD9Q8NBP5 474 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 OR52P1PQ8NH57 321 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 RBCK1Q9BYM8 510 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 TMEM74BQ9NUR3 256 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 LOC105369274A0A096LPK9 316 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 LOC102723532A0A0G2JNH3 316 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 A0A0G2JPF8 293 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 HNRNPCL2B2RXH8 293 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 HNRNPCL3B7ZW38 293 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 LOC110117498-PIK3R3F6TDL0 507 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 P2RX6O15547 441 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 PRICKLE3O43900 615 aaPredicted RBP10.83□□□□□ -0.68
PTPN2-201ENST00000309660 CTSVO60911 334 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 UPK1BO75841 260 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 TSPAN19P0C672 248 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 HNRNPCL4P0DMR1 293 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 PORP16435 677 aaPredicted RBP10.83□□□□□ -0.68
PTPN2-201ENST00000309660 UGT2B10P36537 528 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 MFSD4BQ5TF39 518 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 MRM1Q6IN84 353 aaKnown RBP10.83□□□□□ -0.68
PTPN2-201ENST00000309660 LHFPL3Q86UP9 236 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 OR4N4Q8N0Y3 316 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 HMGB4Q8WW32 186 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 GATAD2BQ8WXI9 593 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 PPP1R14BQ96C90 147 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 C1GALT1C1Q96EU7 318 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 WDR92Q96MX6 357 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 MCHR1Q99705 422 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 OR6C2Q9NZP2 312 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 CFL2Q9Y281 166 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 WDR45Q9Y484 360 aa10.83□□□□□ -0.68
PTPN2-201ENST00000309660 GNSP15586 552 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 CTHP32929 405 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 SMSP52788 366 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 MLC1Q15049 377 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 SMARCD3Q6STE5 483 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 LYSMD2Q8IV50 215 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 GALNT12Q8IXK2 581 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 NRMQ8IXM6 262 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 LRRC25Q8N386 305 aaPredicted RBP10.82□□□□□ -0.68
PTPN2-201ENST00000309660 OR5T3Q8NGG3 340 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 ELSPBP1Q96BH3 223 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 TRMT61AQ96FX7 289 aaKnown RBP10.82□□□□□ -0.68
PTPN2-201ENST00000309660 SLC35A4Q96G79 324 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 MND1Q9BWT6 205 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 SAP130Q9H0E3 1048 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 KLHL3Q9UH77 587 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 HEBP2Q9Y5Z4 205 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 NT5EP21589 574 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 TGM1P22735 817 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 RPS19P39019 145 aaKnown RBP10.82□□□□□ -0.68
PTPN2-201ENST00000309660 ETV5P41161 510 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 ETV1P50549 477 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 SNRPGP62308 76 aaKnown RBP10.82□□□□□ -0.68
PTPN2-201ENST00000309660 CBX3Q13185 183 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 ENPP2Q13822 863 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 GPR18Q14330 331 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 TRMT12Q53H54 448 aaKnown RBP10.82□□□□□ -0.68
PTPN2-201ENST00000309660 ENTPD8Q5MY95 495 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 C12orf73Q69YU5 71 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 C22orf42Q6IC83 251 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 SLC27A4Q6P1M0 643 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 ATCAYQ86WG3 371 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 KIR3DX1Q9H7L2 352 aa10.82□□□□□ -0.68
PTPN2-201ENST00000309660 MARCH7Q9H992 704 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms