RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CACNG6Q9BXT2 260 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 REEP4Q9H6H4 257 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 ZNF639Q9UID6 485 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 TRPM7Q96QT4 1865 aa11.96□□□□□ -0.5
RETREG3-201ENST00000309428 C1orf105O95561 183 aa11.96□□□□□ -0.5
RETREG3-201ENST00000309428 IDSP22304 550 aa11.96□□□□□ -0.5
RETREG3-201ENST00000309428 TGFBR2P37173 567 aa11.96□□□□□ -0.5
RETREG3-201ENST00000309428 IFNGR2P38484 337 aa11.96□□□□□ -0.5
RETREG3-201ENST00000309428 GPR68Q15743 365 aa11.96□□□□□ -0.5
RETREG3-201ENST00000309428 FCRLBQ6BAA4 426 aa11.96□□□□□ -0.5
RETREG3-201ENST00000309428 ISG20Q96AZ6 181 aaKnown RBP11.96□□□□□ -0.5
RETREG3-201ENST00000309428 RSPRY1Q96DX4 576 aa11.96□□□□□ -0.5
RETREG3-201ENST00000309428 TNFRSF10DQ9UBN6 386 aa11.96□□□□□ -0.5
RETREG3-201ENST00000309428 ENTPD4Q9Y227 616 aa11.96□□□□□ -0.5
RETREG3-201ENST00000309428 CHD9Q3L8U1 2897 aa11.96□□□□□ -0.5
RETREG3-201ENST00000309428 H0Y8X5 98 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 RAB36O95755 333 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 HLA-DPB1P04440 258 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 KELP23276 732 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 FADDQ13158 208 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 P2RY14Q15391 338 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 CDKN3Q16667 212 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 KLHL22Q53GT1 634 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 CCDC71Q8IV32 467 aaPredicted RBP11.95□□□□□ -0.5
RETREG3-201ENST00000309428 SERPINA12Q8IW75 414 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 TNFAIP8L1Q8WVP5 186 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 OR2A14Q96R47 310 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 SAV1Q9H4B6 383 aaPredicted RBP11.95□□□□□ -0.5
RETREG3-201ENST00000309428 ZNF69Q9UC07 566 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 STOML2Q9UJZ1 356 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 TBX21Q9UL17 535 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 NPIPA5A0A0B4J1W7 369 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 B4DXG7 233 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 NPIPA7E9PJI5 369 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 PIP5K1CO60331 668 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 IFNA7P01567 189 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 NPIPA8P0DM63 369 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 CD6P30203 668 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 NTSP30990 170 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 ACSL1P33121 698 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.95□□□□□ -0.5
RETREG3-201ENST00000309428 KRT78Q8N1N4 520 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 TRAM1L1Q8N609 369 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 OR52L1Q8NGH7 329 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.95□□□□□ -0.56e-9■■■□□ 15.3
RETREG3-201ENST00000309428 FGF13Q92913 245 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 RFT1Q96AA3 541 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 C1QTNF3Q9BXJ4 246 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 OR51I1Q9H343 314 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 ADAP2Q9NPF8 381 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 MBNL1Q9NR56 388 aaKnown RBP11.95□□□□□ -0.5
RETREG3-201ENST00000309428 TXNL4BQ9NX01 149 aaKnown RBP11.95□□□□□ -0.5
RETREG3-201ENST00000309428 CACNA1EQ15878 2313 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 NARSO43776 548 aaKnown RBP11.95□□□□□ -0.5
RETREG3-201ENST00000309428 CSO75390 466 aaKnown RBP11.95□□□□□ -0.5
RETREG3-201ENST00000309428 RASGRP1O95267 797 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 CSN2P05814 226 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 CBSLP0DN79 551 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 JUNDP17535 347 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 CBSP35520 551 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 GALK2Q01415 458 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 RHAGQ02094 409 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 CDC20Q12834 499 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 INSL4Q14641 139 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 XKRXQ6PP77 449 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 TMEM107Q6UX40 140 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 CPA6Q8N4T0 437 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 POP5Q969H6 163 aaKnown RBP11.95□□□□□ -0.5
RETREG3-201ENST00000309428 RPP25Q9BUL9 199 aaKnown RBP11.95□□□□□ -0.5
RETREG3-201ENST00000309428 STARD5Q9NSY2 213 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 ZNF226Q9NYT6 803 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 SERGEFQ9UGK8 458 aa11.95□□□□□ -0.5
RETREG3-201ENST00000309428 TEX13CA0A0J9YWL9 993 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 L7N2F9 121 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 HCN1O60741 890 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 PAHP00439 452 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 SRPRAP08240 638 aaKnown RBP11.94□□□□□ -0.5
RETREG3-201ENST00000309428 ANXA3P12429 323 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 EN2P19622 333 aaPredicted RBP11.94□□□□□ -0.5
RETREG3-201ENST00000309428 RPL4P36578 427 aaKnown RBP11.94□□□□□ -0.5
RETREG3-201ENST00000309428 RPL35P42766 123 aaKnown RBP11.94□□□□□ -0.5
RETREG3-201ENST00000309428 CCR4P51679 360 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 NDUFAF6Q330K2 333 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 LRRC37A5PQ49AS3 106 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 GARNL3Q5VVW2 1013 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 CDK20Q8IZL9 346 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 METTL27Q8N6F8 245 aaPredicted RBP11.94□□□□□ -0.5
RETREG3-201ENST00000309428 HORMAD2Q8N7B1 307 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 DPAGT1Q9H3H5 408 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 EGLN3Q9H6Z9 239 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 CXorf36Q9H7Y0 433 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 LOC100509620A0A075B734 347 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 TRBV5-4A0A0C4DH59 114 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 AKAP8O43823 692 aaKnown RBP11.94□□□□□ -0.5
RETREG3-201ENST00000309428 ARSBP15848 533 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 GIFP27352 417 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 KIR2DL3P43628 341 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 SRP9P49458 86 aaKnown RBP11.94□□□□□ -0.5
RETREG3-201ENST00000309428 STARP49675 285 aa11.94□□□□□ -0.5
RETREG3-201ENST00000309428 FAM78AQ5JUQ0 283 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms