RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 RRAGDQ9NQL2 400 aaPredicted RBP18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 COQ3Q9NZJ6 369 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 Q9UFV3 132 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 MID2Q9UJV3 735 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 ACAD8Q9UKU7 415 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 AKAP9Q99996 3911 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 NKX2-6A6NCS4 301 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 PLOD2O00469 737 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 NPHS1O60500 1241 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 ERN1O75460 977 aaKnown RBP18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 BCAS2O75934 225 aaPredicted RBP18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 JUNP05412 331 aaKnown RBP18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 MC3RP41968 323 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 GAS1P54826 345 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 SNTA1Q13424 505 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 RFTN2Q52LD8 501 aaPredicted RBP18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 EIPR1Q53HC9 387 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 ZNF385BQ569K4 471 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 NHSL2Q5HYW2 709 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 DCST1Q5T197 706 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 C1orf185Q5T7R7 199 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 CES4AQ5XG92 561 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 VASNQ6EMK4 673 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 ACAD11Q709F0 780 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 IKBIPQ70UQ0 350 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 ULK2Q8IYT8 1036 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 AMDHD1Q96NU7 426 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 TIMP4Q99727 224 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 PRDM14Q9GZV8 571 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 LRTM1Q9HBL6 345 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 PFDN4Q9NQP4 134 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 C1orf109Q9NX04 203 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 B4GALT7Q9UBV7 327 aa18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 C19orf53Q9UNZ5 99 aaPredicted RBP18.09■□□□□ 0.49
PDZRN3-202ENST00000308537 NUP214P35658 2090 aaPredicted RBP18.08■□□□□ 0.49
PDZRN3-202ENST00000308537 C2orf72A6NCS6 295 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 UPK1AO00322 258 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 GNB5O14775 395 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 LSM1O15116 133 aaKnown RBP18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 COX6B1P14854 86 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 SDC1P18827 310 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 MPIP34949 423 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 ERCC6LQ2NKX8 1250 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 ARL13AQ5H913 290 aaPredicted RBP18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 WLSQ5T9L3 541 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 SLC30A6Q6NXT4 461 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 ANGPTL8Q6UXH0 198 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 ZCCHC23Q6ZST2 131 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 PACS2Q86VP3 889 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 OR2L13Q8N349 312 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 CDC26Q8NHZ8 85 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 BBS4Q96RK4 519 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 OSBPL11Q9BXB4 747 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 STMN4Q9H169 189 aaPredicted RBP18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 GIMAP4Q9NUV9 329 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 SLC6A5Q9Y345 797 aa18.08■□□□□ 0.48
PDZRN3-202ENST00000308537 PRAMEF25A6NGN4 478 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 C17orf51A8MQB3 221 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 SLC28A1O00337 649 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 TBX19O60806 448 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 SEC22BO75396 215 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 CRCPO75575 148 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 IFI6P09912 130 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 ELAVL4P26378 380 aaKnown RBP18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 MSX1P28360 303 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 FRKP42685 505 aaPredicted RBP18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 MASP1P48740 699 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 NCBP2P52298 156 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 RPP38P78345 283 aaKnown RBP18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 PDE7AQ13946 482 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 XKR7Q5GH72 579 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 POMZP3Q6PJE2 187 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 TMEM107Q6UX40 140 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 NAXEQ8NCW5 288 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 HOXB13Q92826 284 aaPredicted RBP18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 ELP4Q96EB1 424 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 COL21A1Q96P44 957 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 ADOQ96SZ5 270 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 CCT7Q99832 543 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 UGT2B28Q9BY64 529 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 EXO5Q9H790 373 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 METTL7AQ9H8H3 244 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 MIEF1Q9NQG6 463 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 FIS1Q9Y3D6 152 aa18.07■□□□□ 0.48
PDZRN3-202ENST00000308537 FAM90A27PA6NNH2 459 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 SLITRK5O94991 958 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 HOXD4P09016 255 aaPredicted RBP18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 LINC00032P0C843 101 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 GABRA1P14867 456 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 BMP7P18075 431 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 MAP3K8P41279 467 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 ZNF844Q08AG5 666 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 ACSF3Q4G176 576 aaPredicted RBP18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 TNFAIP8L3Q5GJ75 292 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 WIPI1Q5MNZ9 446 aaPredicted RBP18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 ANKRD26P1Q6NSI1 321 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 GDF7Q7Z4P5 450 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 FAM83FQ8NEG4 500 aaPredicted RBP18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 OR1J4Q8NGS1 313 aa18.06■□□□□ 0.48
PDZRN3-202ENST00000308537 TWIST2Q8WVJ9 160 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms