RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 FFAR1O14842 300 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 PRKNO60260 465 aaPredicted RBP13.75□□□□□ -0.21
PTPN9-201ENST00000306726 MMP11P24347 488 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 MTNR1AP48039 350 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 GIPRP48546 466 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 CLDN12P56749 244 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 OR10A3P58181 314 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 HYAL2Q12891 473 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 NRMQ8IXM6 262 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 PIAS4Q8N2W9 510 aaPredicted RBP13.75□□□□□ -0.21
PTPN9-201ENST00000306726 OR8J2Q8NGG1 315 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 OR4D11Q8NGI4 311 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 OR8J1Q8NGP2 316 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 OR10G6Q8NH81 332 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 SPRYD4Q8WW59 207 aaPredicted RBP13.75□□□□□ -0.21
PTPN9-201ENST00000306726 ZNF559Q9BR84 538 aa13.75□□□□□ -0.21
PTPN9-201ENST00000306726 H7C0S8 307 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 FZD6O60353 706 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 RPP14O95059 124 aaKnown RBP13.74□□□□□ -0.21
PTPN9-201ENST00000306726 RASGRP1O95267 797 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 SLC38A6Q8IZM9 456 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 RIT1Q92963 219 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 ZNF566Q969W8 418 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 PMEPA1Q969W9 287 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 MAGEB10Q96LZ2 347 aaPredicted RBP13.74□□□□□ -0.21
PTPN9-201ENST00000306726 SLC46A2Q9BY10 475 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 AHSPQ9NZD4 102 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 HCN2Q9UL51 889 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 RP1L1Q8IWN7 2480 aaPredicted RBP13.74□□□□□ -0.21
PTPN9-201ENST00000306726 ORC5O43913 435 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 GPR37L1O60883 481 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 FABP5Q01469 135 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 ZNF630Q2M218 657 aaPredicted RBP13.74□□□□□ -0.21
PTPN9-201ENST00000306726 GXYLT1Q4G148 440 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 FAM209AQ5JX71 171 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 CCDC190Q86UF4 302 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 VN1R2Q8NFZ6 395 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 OR52I1Q8NGK6 324 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 QRFPRQ96P65 431 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 CLEC4MQ9H2X3 399 aaPredicted RBP13.74□□□□□ -0.21
PTPN9-201ENST00000306726 MAPRE3Q9UPY8 281 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 GRIP1Q9Y3R0 1128 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 A0A075B6Q4 140 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 NRG2O14511 850 aaPredicted RBP13.74□□□□□ -0.21
PTPN9-201ENST00000306726 HOXB3P14651 431 aaPredicted RBP13.74□□□□□ -0.21
PTPN9-201ENST00000306726 NPPBP16860 134 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 SHC1P29353 583 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 IRS1P35568 1242 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 CCR4P51679 360 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 RAB14P61106 215 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 PSPHP78330 225 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 C9orf43Q8TAL5 461 aaPredicted RBP13.74□□□□□ -0.21
PTPN9-201ENST00000306726 CEP76Q8TAP6 659 aa13.74□□□□□ -0.21
PTPN9-201ENST00000306726 TEFMQ96QE5 360 aaKnown RBP13.74□□□□□ -0.21
PTPN9-201ENST00000306726 MKRN2Q9H000 416 aaKnown RBP13.74□□□□□ -0.21
PTPN9-201ENST00000306726 MTCL1Q9Y4B5 1905 aaKnown RBP13.74□□□□□ -0.21
PTPN9-201ENST00000306726 A0A1B0GVT2 93 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 RAB36O95755 333 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 ELAVL4P26378 380 aaKnown RBP13.73□□□□□ -0.21
PTPN9-201ENST00000306726 PYCR1P32322 319 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 MAGEB1P43366 347 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 AKIRIN2Q53H80 203 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 FAAP20Q6NZ36 180 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 ZER1Q7Z7L7 766 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 KRT78Q8N1N4 520 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 L3MBTL4Q8NA19 623 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 ECHDC3Q96DC8 303 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 RIPOR3Q96MK2 946 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 DMRT3Q9NQL9 472 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 PCDHGB1Q9Y5G3 927 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 PRUNE2Q8WUY3 3088 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 MYO16Q9Y6X6 1858 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 DAPL1A0PJW8 107 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 GRXCR2A6NFK2 248 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 HEPACAM2A8MVW5 462 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 ERVH48-1M5A8F1 160 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 PAK4O96013 591 aaPredicted RBP13.73□□□□□ -0.21
PTPN9-201ENST00000306726 TP53P04637 393 aaPredicted RBP13.73□□□□□ -0.21
PTPN9-201ENST00000306726 HMGN2P05204 90 aaKnown RBP13.73□□□□□ -0.21
PTPN9-201ENST00000306726 FURINP09958 794 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.73□□□□□ -0.21
PTPN9-201ENST00000306726 MPEG1Q2M385 716 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 C11orf88Q6PI97 169 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 ANKK1Q8NFD2 765 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 SAMD8Q96LT4 415 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 TEX12Q9BXU0 123 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 TAAR2Q9P1P5 351 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 USP36Q9P275 1121 aaKnown RBP13.73□□□□□ -0.21
PTPN9-201ENST00000306726 NCKAP1Q9Y2A7 1128 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 LOC100509620A0A075B734 347 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 MEIS3P1A6NDR6 274 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 HMX3A6NHT5 357 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 RAD1O60671 282 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 MT-ND4P03905 459 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 LTB4RQ15722 352 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 SLCO4C1Q6ZQN7 724 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 C12orf76Q8N812 135 aaPredicted RBP13.73□□□□□ -0.21
PTPN9-201ENST00000306726 DNAJB8Q8NHS0 232 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 KATNB1Q9BVA0 655 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 IFT27Q9BW83 186 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms