RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 FESP07332 822 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 ZNF26P17031 533 aaPredicted RBP16.31■□□□□ 0.2
KRT28-201ENST00000306658 TGM1P22735 817 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 KCNJ5P48544 419 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 RAB15P59190 212 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 POU6F2P78424 691 aaPredicted RBP16.31■□□□□ 0.2
KRT28-201ENST00000306658 KCNC4Q03721 635 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 DUSP8Q13202 625 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 TAF11Q15544 211 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 ISXQ2M1V0 245 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 OR2T5Q6IEZ7 315 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 PPP4R4Q6NUP7 873 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 SVOPLQ8N434 492 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 GALNT4Q8N4A0 578 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 OR2T29Q8NH02 315 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 TMBIM1Q969X1 311 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 FKBP10Q96AY3 582 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 SENP5Q96HI0 755 aaPredicted RBP16.31■□□□□ 0.2
KRT28-201ENST00000306658 FBXL20Q96IG2 436 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 ART5Q96L15 291 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 ZNF347Q96SE7 839 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 SDF2Q99470 211 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 SLC26A1Q9H2B4 701 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 MTHFD2LQ9H903 347 aaPredicted RBP16.31■□□□□ 0.2
KRT28-201ENST00000306658 CACYBPQ9HB71 228 aaKnown RBP16.31■□□□□ 0.2
KRT28-201ENST00000306658 FAM86C1Q9NVL1 165 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 ABCG2Q9UNQ0 655 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 LOXL2Q9Y4K0 774 aa16.31■□□□□ 0.2
KRT28-201ENST00000306658 EP300Q09472 2414 aaPredicted RBP16.31■□□□□ 0.2
KRT28-201ENST00000306658 PCNX2A6NKB5 2137 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 A8MUA0 341 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 ALPPP05187 535 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 HEXBP07686 556 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 CDK4P11802 303 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 CD247P20963 164 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 AQP4P55087 323 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 CHRNEQ04844 493 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 TRIP6Q15654 476 aaKnown RBP16.3■□□□□ 0.2
KRT28-201ENST00000306658 DCST2Q5T1A1 773 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 DCAF12Q5T6F0 453 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 CDCP2Q5VXM1 449 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 PIP4P1Q86T03 277 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 ZDHHC13Q8IUH4 622 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 ZNF615Q8N8J6 731 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 OR14A16Q8NHC5 309 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 PMM1Q92871 262 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 SDCCAG3Q96C92 435 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 ZNF354BQ96LW1 612 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 VSTM2LQ96N03 204 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 ZPBPQ9BS86 351 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 ULBP3Q9BZM4 244 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 THSD1Q9NS62 852 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 DSPPQ9NZW4 1301 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 CFL2Q9Y281 166 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 WDR45Q9Y484 360 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 SPEGQ15772 3267 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 COL27A1Q8IZC6 1860 aaPredicted RBP16.3■□□□□ 0.2
KRT28-201ENST00000306658 VSTM2BA6NLU5 285 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 G3V2T6 193 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 DPM1O60762 260 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 E2F6O75461 281 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 STX11O75558 287 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 IFNW1P05000 195 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 OR1E2P47887 323 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 HSPA13P48723 471 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 ARHGDIAP52565 204 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 PSG6Q00889 435 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 STPG1Q5TH74 334 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 RAB11FIP2Q7L804 512 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 OLIG3Q7RTU3 272 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 EPHX4Q8IUS5 362 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 CBR4Q8N4T8 237 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 C16orf52Q8NHV5 167 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 METTL21AQ8WXB1 218 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 PIK3R3Q92569 461 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 LIN37Q96GY3 246 aaPredicted RBP16.3■□□□□ 0.2
KRT28-201ENST00000306658 SLC29A1Q99808 456 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 POLE3Q9NRF9 147 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 IFT52Q9Y366 437 aa16.3■□□□□ 0.2
KRT28-201ENST00000306658 FAM32AQ9Y421 112 aaKnown RBP16.3■□□□□ 0.2
KRT28-201ENST00000306658 KIF26BQ2KJY2 2108 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 IDSB3KWA1 339 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 PDLIM1O00151 329 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 SOCS2O14508 198 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 ACOX3O15254 700 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 FCMRO60667 390 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 RASAL1O95294 804 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 MT-CO3P00414 261 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 CYC1P08574 325 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 PABPC4LP0CB38 370 aaKnown RBP16.29■□□□□ 0.2
KRT28-201ENST00000306658 ACADSP16219 412 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 ZNF28P17035 718 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 EFNA3P52797 238 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 NRF1Q16656 503 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 CYP27C1Q4G0S4 372 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 IQCCQ4KMZ1 466 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 ZNF311Q5JNZ3 666 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 FRRS1Q6ZNA5 592 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 SHISA6Q6ZSJ9 500 aa16.29■□□□□ 0.2
KRT28-201ENST00000306658 GLRX5Q86SX6 157 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms