RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RPL17P18621 184 aaKnown RBP12.78□□□□□ -0.36
TRIM56-201ENST00000306085 BMXP51813 675 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 RPS18P62269 152 aaKnown RBP12.78□□□□□ -0.36
TRIM56-201ENST00000306085 VGLL4Q14135 290 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 MED16Q9Y2X0 877 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 CAPNS1P04632 268 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 SIRPB2Q5JXA9 342 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 SULF2Q8IWU5 870 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 RBMXL3Q8N7X1 1067 aaKnown RBP12.78□□□□□ -0.36
TRIM56-201ENST00000306085 SLC30A7Q8NEW0 376 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 MAP3K3Q99759 626 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 FBXL12Q9NXK8 326 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 SAGE1Q9NXZ1 904 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 EBF1Q9UH73 591 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 DLGAP4Q9Y2H0 992 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 A0A1W2PP18 115 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 LRCH4O75427 683 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 TMEM173Q86WV6 379 aaPredicted RBP12.78□□□□□ -0.36
TRIM56-201ENST00000306085 SYT14Q8NB59 555 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 SGK3Q96BR1 496 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 A0A096LPI6 279 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 HLA-DQB2P05538 268 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 ZNF763Q0D2J5 394 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 GDF6Q6KF10 455 aaPredicted RBP12.78□□□□□ -0.36
TRIM56-201ENST00000306085 FUT10Q6P4F1 479 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 NAA40Q86UY6 237 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 SORCS2Q96PQ0 1159 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 STRADBQ9C0K7 418 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 LIN7CQ9NUP9 197 aaKnown RBP12.78□□□□□ -0.36
TRIM56-201ENST00000306085 ADAM10O14672 748 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 NT5C3BQ969T7 300 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 PCED1BQ96HM7 432 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 SLC25A31Q9H0C2 315 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 CDH20Q9HBT6 801 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 RNF17Q9BXT8 1623 aaKnown RBP12.78□□□□□ -0.36
TRIM56-201ENST00000306085 CHRNA1P02708 482 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 SSTR2P30874 369 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 HOXA1P49639 335 aaPredicted RBP12.78□□□□□ -0.36
TRIM56-201ENST00000306085 PRRT3Q5FWE3 981 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 TMEM107Q6UX40 140 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 TMIGD1Q6UXZ0 262 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 OR4K1Q8NGD4 311 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 PPTC7Q8NI37 304 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 LRR1Q96L50 414 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 SLC29A3Q9BZD2 475 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 PITHD1Q9GZP4 211 aaPredicted RBP12.78□□□□□ -0.36
TRIM56-201ENST00000306085 OMGP23515 440 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 OR13C4Q8NGS5 318 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 OR8U1Q8NH10 309 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 FAM234AQ9H0X4 552 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 TNFSF4P23510 183 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 ZNF169Q14929 603 aaPredicted RBP12.77□□□□□ -0.36
TRIM56-201ENST00000306085 LEG1Q6P5S2 330 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 GDPD4Q6W3E5 623 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 TBC1D20Q96BZ9 403 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 GPR83Q9NYM4 423 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 ABCC3O15438 1527 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 VSTM2BA6NLU5 285 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 CIDEAO60543 219 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 FBXO24O75426 580 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 UBBP0CG47 229 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 UBCP0CG48 685 aaKnown RBP12.77□□□□□ -0.36
TRIM56-201ENST00000306085 PLCXD2Q0VAA5 305 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 SLC14A1Q13336 389 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 CCNJQ5T5M9 372 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 IL34Q6ZMJ4 242 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 ZNF597Q96LX8 424 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 HRASLSQ9HDD0 168 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 FZD10Q9ULW2 581 aa12.77□□□□□ -0.36
TRIM56-201ENST00000306085 PTGER4P35408 488 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 GDF5P43026 501 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 OGDHQ02218 1023 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 ZNF783Q6ZMS7 281 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 PTCHD1Q96NR3 888 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 SOX17Q9H6I2 414 aaPredicted RBP12.77□□□□□ -0.37
TRIM56-201ENST00000306085 DERAQ9Y315 318 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 CACNG2Q9Y698 323 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 YY2O15391 372 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 CLINT1Q14677 625 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 ETFRF1Q6IPR1 90 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 PLPPR4Q7Z2D5 763 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 IL17RDQ8NFM7 739 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 OR9A4Q8NGU2 314 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 MUS81Q96NY9 551 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 OR51E2Q9H255 320 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 ACKR4Q9NPB9 350 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 VSX1Q9NZR4 365 aaPredicted RBP12.77□□□□□ -0.37
TRIM56-201ENST00000306085 RHBDD3Q9Y3P4 386 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 PRR36Q9H6K5 1346 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 IQGAP3Q86VI3 1631 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 TRAPPC13A5PLN9 417 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 GABRDO14764 452 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 PMM2O15305 246 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 BCAS2O75934 225 aaPredicted RBP12.77□□□□□ -0.37
TRIM56-201ENST00000306085 CD79AP11912 226 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 F3P13726 295 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 CTRB1P17538 263 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 FOXN2P32314 431 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 ARSFP54793 590 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 MELKQ14680 651 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms