RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SLC35A4Q96G79 324 aa24.18■■□□□ 1.46
CDKN2A-201ENST00000304494 DDX18Q9NVP1 670 aaKnown RBP24.18■■□□□ 1.46
CDKN2A-201ENST00000304494 C19orf53Q9UNZ5 99 aaPredicted RBP24.18■■□□□ 1.46
CDKN2A-201ENST00000304494 RNF6Q9Y252 685 aa24.18■■□□□ 1.46
CDKN2A-201ENST00000304494 ZNF407Q9C0G0 2248 aa24.18■■□□□ 1.46
CDKN2A-201ENST00000304494 CENPEQ02224 2701 aa24.18■■□□□ 1.46
CDKN2A-201ENST00000304494 PRAMEF25A6NGN4 478 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 TMEM233B4DJY2 109 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 PIP5K1BO14986 540 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 CTIFO43310 598 aaKnown RBP24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 ICOSLGO75144 302 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 IFI6P09912 130 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 SDC1P18827 310 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 IL12BP29460 328 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 PTGER4P35408 488 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 NUP107P57740 925 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 MRPS22P82650 360 aaKnown RBP24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 TOMM20Q15388 145 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 GALNTL6Q49A17 601 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 ANGPTL8Q6UXH0 198 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 SLC44A2Q8IWA5 706 aaPredicted RBP24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 OR2L13Q8N349 312 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 AGR3Q8TD06 166 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 GFM2Q969S9 779 aaKnown RBP24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 TTYH2Q9BSA4 534 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 REEP4Q9H6H4 257 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 OR10H1Q9Y4A9 318 aa24.17■■□□□ 1.46
CDKN2A-201ENST00000304494 C15orf38-AP3S2A0A0A6YYH1 394 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 FAM47E-STBD1D6RA91 191 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 GNB5O14775 395 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 SNPHO15079 494 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 TBX19O60806 448 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 PTPN6P29350 595 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 ETV4P43268 484 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 C1orf185Q5T7R7 199 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 DESI1Q6ICB0 168 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 NPSR1Q6W5P4 371 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 LARP4Q71RC2 724 aaKnown RBP eCLIP24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 PPCDCQ96CD2 204 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 ELP4Q96EB1 424 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 PPP3R2Q96LZ3 170 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 TSSK3Q96PN8 268 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 ADOQ96SZ5 270 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 GALNT9Q9HCQ5 603 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 SSU72Q9NP77 194 aaKnown RBP24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 ALKBH4Q9NXW9 302 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 FAM215AQ9Y5M1 114 aa24.16■■□□□ 1.46
CDKN2A-201ENST00000304494 TMEM114B3SHH9 223 aa24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 UPK1AO00322 258 aa24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 PDPK1O15530 556 aa24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 TSPAN2O60636 221 aa24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 NME6O75414 186 aaPredicted RBP24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 DDX5P17844 614 aaKnown RBP24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 MAPK1P28482 360 aa24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 PTGDSP41222 190 aa24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 ASMTP46597 345 aa24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 PNLIPRP2P54317 469 aa24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 ZNHIT3Q15649 155 aaPredicted RBP24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 NUDCD3Q8IVD9 361 aa24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 OR10Q1Q8NGQ4 319 aa24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 LILRB4Q8NHJ6 448 aa24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 ZFP28Q8NHY6 868 aa24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 PPP1R14CQ8TAE6 165 aa24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 DTNBP1Q96EV8 351 aa24.15■■□□□ 1.46
CDKN2A-201ENST00000304494 PSMG1O95456 288 aa24.14■■□□□ 1.45
CDKN2A-201ENST00000304494 GLI4P10075 376 aa24.14■■□□□ 1.45
CDKN2A-201ENST00000304494 PSG6Q00889 435 aa24.14■■□□□ 1.45
CDKN2A-201ENST00000304494 RTL6Q6ICC9 239 aa24.14■■□□□ 1.45
CDKN2A-201ENST00000304494 CROCCP2Q86T23 111 aa24.14■■□□□ 1.45
CDKN2A-201ENST00000304494 MCEMP1Q8IX19 187 aa24.14■■□□□ 1.45
CDKN2A-201ENST00000304494 PM20D2Q8IYS1 436 aa24.14■■□□□ 1.45
CDKN2A-201ENST00000304494 OR6Y1Q8NGX8 325 aa24.14■■□□□ 1.45
CDKN2A-201ENST00000304494 MTERF3Q96E29 417 aa24.14■■□□□ 1.45
CDKN2A-201ENST00000304494 ZBED6CLQ96FA7 236 aaPredicted RBP24.14■■□□□ 1.45
CDKN2A-201ENST00000304494 NINQ8N4C6 2090 aa24.14■■□□□ 1.45
CDKN2A-201ENST00000304494 NCKAP5O14513 1909 aa24.14■■□□□ 1.45
CDKN2A-201ENST00000304494 DNAJC13O75165 2243 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 C19orf84I3L1E1 186 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 AKAP10O43572 662 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 CBR3O75828 277 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 BCKDHAP12694 445 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 GCKP35557 465 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 CRYZQ08257 329 aaKnown RBP24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 HSPB3Q12988 150 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 PDE7AQ13946 482 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 CYP27C1Q4G0S4 372 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 ATP6AP1LQ52LC2 224 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 XKR7Q5GH72 579 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 NHSL2Q5HYW2 709 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 ANKRD26P1Q6NSI1 321 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 R3HCC1LQ7Z5L2 792 aaKnown RBP24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 ULK2Q8IYT8 1036 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 SH3BP4Q9P0V3 963 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 BAIAP2L1Q9UHR4 511 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 MAPRE3Q9UPY8 281 aa24.13■■□□□ 1.45
CDKN2A-201ENST00000304494 PCNX1Q96RV3 2341 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 TEX15Q9BXT5 2789 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 C2orf72A6NCS6 295 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 TTC36A6NLP5 189 aa24.12■■□□□ 1.45
CDKN2A-201ENST00000304494 AHRRA9YTQ3 701 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms