RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 OLIG3Q7RTU3 272 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 SERPINA12Q8IW75 414 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 NAGSQ8N159 534 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 GALNT15Q8N3T1 639 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 OR51Q1Q8NH59 317 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 CD300LFQ8TDQ1 290 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 INSM2Q96T92 566 aaPredicted RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 UBE2ZQ9H832 354 aaPredicted RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 ARMC1Q9NVT9 282 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 ABCG2Q9UNQ0 655 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 AP1M2Q9Y6Q5 423 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 TRAV27A0A087WT01 109 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 GXYLT2A0PJZ3 443 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 PMM2O15305 246 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 HLA-FP30511 346 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 PSMA6P60900 246 aaKnown RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 BCL2L15Q5TBC7 163 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 USP43Q70EL4 1123 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 ESX1Q8N693 406 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 NEIL2Q969S2 332 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 FAM46BQ96A09 425 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 ZMYND19Q96E35 227 aaPredicted RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 AIFM2Q9BRQ8 373 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 RXFP3Q9NSD7 469 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 TRGV8A0A0C4DH27 118 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 A0A1B0GVC2 190 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 C1SP09871 688 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 FOXA1P55317 472 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 ERVPABLB-1P60509 514 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF687Q8N1G0 1237 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 TMEM19Q96HH6 336 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 THOC3Q96J01 351 aaKnown RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 DCDC2BA2VCK2 349 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 GABBR2O75899 941 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 KNG1P01042 644 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 CD68P34810 354 aaPredicted RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 GPR19Q15760 415 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 CCDC58Q4VC31 144 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 MARCH8Q5T0T0 291 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 NANOGP8Q6NSW7 305 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 ENPP6Q6UWR7 440 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 SECISBP2Q96T21 854 aaKnown RBP7.39□□□□□ -1.23
SCN9A-201ENST00000303354 WWTR1Q9GZV5 400 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 NANOGQ9H9S0 305 aa7.39□□□□□ -1.23
SCN9A-201ENST00000303354 H3BUI4 141 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 H7C1C5 153 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 CRHBPP24387 322 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 LCN6P62502 163 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 NKPD1Q17RQ9 610 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 SLC36A3Q495N2 470 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 ACVR1CQ8NER5 493 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 OR5J2Q8NH18 312 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 RFT1Q96AA3 541 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 TRIM36Q9NQ86 728 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 ABCC6O95255 1503 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 ERVK-25P63136 954 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 INCA1Q0VD86 236 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 SRSF5Q13243 272 aaKnown RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 RAB12Q6IQ22 244 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 VASH2Q86V25 355 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 DUSP19Q8WTR2 217 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 POT1Q9NUX5 634 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 TMEM59LQ9UK28 342 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 ALOX12BO75342 701 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 ENTPD6O75354 484 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 F13BP05160 661 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 SLC15A1P46059 708 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 ARSFP54793 590 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 C6orf136Q5SQH8 315 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 SLC30A8Q8IWU4 369 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 NRMQ8IXM6 262 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 OR5AS1Q8N127 324 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF610Q8N9Z0 462 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 DCLRE1CQ96SD1 692 aaKnown RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 GNB4Q9HAV0 340 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 WDR6Q9NNW5 1121 aaKnown RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 KANTRA0A1W2PQU2 76 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 GPR157Q5UAW9 335 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 CCDC86Q9H6F5 360 aaKnown RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 PLSCR5A0PG75 271 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 GFRA2O00451 464 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 FBP2O00757 339 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 TIMM8AO60220 97 aaPredicted RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 FMO6PO60774 539 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 PRAMEF2O60811 474 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 S100A9P06702 114 aaKnown RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 CD46P15529 392 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 FBXO43Q4G163 708 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 PLCXD3Q63HM9 321 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 C22orf42Q6IC83 251 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 FUZQ9BT04 418 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 QRSL1Q9H0R6 528 aaKnown RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 C6orf106Q9H6K1 298 aaPredicted RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 J3KTA2 159 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 H6PDO95479 791 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 LAMP1P11279 417 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 GABRA5P31644 462 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 GCGRP47871 477 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms