RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 ZNF763Q0D2J5 394 aa16.65■□□□□ 0.26
TMEM88-201ENST00000301599 EIPR1Q53HC9 387 aa16.65■□□□□ 0.26
TMEM88-201ENST00000301599 CT45A2Q5DJT8 189 aa16.65■□□□□ 0.26
TMEM88-201ENST00000301599 WIPI1Q5MNZ9 446 aaPredicted RBP16.65■□□□□ 0.26
TMEM88-201ENST00000301599 FAM9CQ8IZT9 166 aa16.65■□□□□ 0.26
TMEM88-201ENST00000301599 ABTB1Q969K4 478 aaPredicted RBP16.65■□□□□ 0.26
TMEM88-201ENST00000301599 ZNF559Q9BR84 538 aa16.65■□□□□ 0.26
TMEM88-201ENST00000301599 UGT2B28Q9BY64 529 aa16.65■□□□□ 0.26
TMEM88-201ENST00000301599 STMN4Q9H169 189 aaPredicted RBP16.65■□□□□ 0.26
TMEM88-201ENST00000301599 ANKRA2Q9H9E1 313 aa16.65■□□□□ 0.26
TMEM88-201ENST00000301599 SENP1Q9P0U3 644 aa16.65■□□□□ 0.26
TMEM88-201ENST00000301599 CAMK2AQ9UQM7 478 aa16.65■□□□□ 0.26
TMEM88-201ENST00000301599 PRAMEF25A6NGN4 478 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 SNPHO15079 494 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 ERN1O75460 977 aaKnown RBP16.64■□□□□ 0.25
TMEM88-201ENST00000301599 ACTL6AO96019 429 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 IL2RAP01589 272 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 UROSP10746 265 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 KRT4P19013 534 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 CEACAM8P31997 349 aaPredicted RBP16.64■□□□□ 0.25
TMEM88-201ENST00000301599 TIMP3P35625 211 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 PTGDSP41222 190 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 EFR3AQ14156 821 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 ACSF3Q4G176 576 aaPredicted RBP16.64■□□□□ 0.25
TMEM88-201ENST00000301599 FAM71E1Q6IPT2 247 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 SEM1Q6ZVN7 128 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 WDR53Q7Z5U6 358 aaPredicted RBP16.64■□□□□ 0.25
TMEM88-201ENST00000301599 YRDCQ86U90 279 aaKnown RBP16.64■□□□□ 0.25
TMEM88-201ENST00000301599 LACC1Q8IV20 430 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 FAM83FQ8NEG4 500 aaPredicted RBP16.64■□□□□ 0.25
TMEM88-201ENST00000301599 CDC26Q8NHZ8 85 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.64■□□□□ 0.25
TMEM88-201ENST00000301599 DTNBP1Q96EV8 351 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 SLC35A4Q96G79 324 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 WDYHV1Q96HA8 205 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 METTL2AQ96IZ6 378 aaKnown RBP16.64■□□□□ 0.25
TMEM88-201ENST00000301599 VSTM2LQ96N03 204 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 ADOQ96SZ5 270 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 FOLH1BQ9HBA9 442 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 GALNT9Q9HCQ5 603 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 MIEF1Q9NQG6 463 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 TACC2O95359 2948 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 NCKAP5O14513 1909 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 CSMD1Q96PZ7 3565 aa16.64■□□□□ 0.25
TMEM88-201ENST00000301599 INTS1Q8N201 2190 aaKnown RBP16.64■□□□□ 0.25
TMEM88-201ENST00000301599 HCFC1P51610 2035 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 A0A087WV62 115 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 SYT5O00445 386 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 DVL2O14641 736 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 TSPAN2O60636 221 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 SEC22BO75396 215 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 RSL1D1O76021 490 aaKnown RBP16.63■□□□□ 0.25
TMEM88-201ENST00000301599 SLITRK5O94991 958 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 PNLIPRP2P54317 469 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 CORO7P57737 925 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 MRPS22P82650 360 aaKnown RBP16.63■□□□□ 0.25
TMEM88-201ENST00000301599 SLC18A2Q05940 514 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 MYBPHQ13203 477 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 NSUN5P2Q63ZY6 315 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 NOXRED1Q6NXP6 359 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 ARSKQ6UWY0 536 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 LARP4Q71RC2 724 aaKnown RBP eCLIP16.63■□□□□ 0.25
TMEM88-201ENST00000301599 SLC44A2Q8IWA5 706 aaPredicted RBP16.63■□□□□ 0.25
TMEM88-201ENST00000301599 HOMEZQ8IX15 550 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 WDSUB1Q8N9V3 476 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 TNIP2Q8NFZ5 429 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 OR7G2Q8NG99 324 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 LRRC46Q96FV0 321 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 C12orf65Q9H3J6 166 aaKnown RBP16.63■□□□□ 0.25
TMEM88-201ENST00000301599 MYNNQ9NPC7 610 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 SERHLQ9NQF3 203 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 ZNF629Q9UEG4 869 aaPredicted RBP16.63■□□□□ 0.25
TMEM88-201ENST00000301599 MID2Q9UJV3 735 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 ITGB1BP2Q9UKP3 347 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 MAPRE3Q9UPY8 281 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 FREM3P0C091 2139 aa16.63■□□□□ 0.25
TMEM88-201ENST00000301599 CD8B2A6NJW9 211 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 SLC28A1O00337 649 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 COQ9O75208 318 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 NME6O75414 186 aaPredicted RBP16.62■□□□□ 0.25
TMEM88-201ENST00000301599 SASH3O75995 380 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 JUNP05412 331 aaKnown RBP16.62■□□□□ 0.25
TMEM88-201ENST00000301599 IL12BP29460 328 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 PEX19P40855 299 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 NCBP2P52298 156 aaKnown RBP eCLIP16.62■□□□□ 0.25
TMEM88-201ENST00000301599 DLX5P56178 289 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 LIPMQ5VYY2 423 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 PLCZ1Q86YW0 608 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 OR14L1PQ8NHC6 308 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 ZPLD1Q8TCW7 415 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 EPS8L3Q8TE67 593 aaKnown RBP16.62■□□□□ 0.25
TMEM88-201ENST00000301599 CAVIN3Q969G5 261 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 TRIB1Q96RU8 372 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 CALHM2Q9HA72 323 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 OR10H1Q9Y4A9 318 aa16.62■□□□□ 0.25
TMEM88-201ENST00000301599 POLR3HQ9Y535 204 aaPredicted RBP16.62■□□□□ 0.25
TMEM88-201ENST00000301599 TLDC2A0PJX2 215 aa16.61■□□□□ 0.25
TMEM88-201ENST00000301599 PLOD2O00469 737 aa16.61■□□□□ 0.25
TMEM88-201ENST00000301599 CPN1P15169 458 aa16.61■□□□□ 0.25
TMEM88-201ENST00000301599 RCAN2Q14206 197 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms