RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.65□□□□□ -0.06
HERPUD1-201ENST00000300302 CNDP2Q96KP4 475 aaKnown RBP14.65□□□□□ -0.06
HERPUD1-201ENST00000300302 NECTIN3Q9NQS3 549 aa14.65□□□□□ -0.06
HERPUD1-201ENST00000300302 IFT52Q9Y366 437 aa14.65□□□□□ -0.06
HERPUD1-201ENST00000300302 MYO15AQ9UKN7 3530 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 SYT5O00445 386 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 DYRK3O43781 588 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 STX11O75558 287 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 GADD45GO95257 159 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 LDOC1O95751 146 aaPredicted RBP14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 RECKO95980 971 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 ATXN8OSP0DMR3 200 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 CDH2P19022 906 aaPredicted RBP14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 TNNI3P19429 210 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 S1PR1P21453 382 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 ZNF267Q14586 743 aaPredicted RBP14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 ZIK1Q3SY52 487 aaPredicted RBP14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 MINDY4Q4G0A6 757 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 DCST2Q5T1A1 773 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 PHF19Q5T6S3 580 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 C1orf189Q5VU69 101 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 TTC23Q5W5X9 447 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 TMEM154Q6P9G4 183 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 FRRS1Q6ZNA5 592 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 PEX5LQ8IYB4 626 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 VANGL1Q8TAA9 524 aaPredicted RBP14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 PHF10Q8WUB8 498 aaKnown RBP14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 HOXB13Q92826 284 aaPredicted RBP14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 SDF2Q99470 211 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 TOR3AQ9H497 397 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 MKKSQ9NPJ1 570 aaPredicted RBP14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 ZNF232Q9UNY5 417 aa14.64□□□□□ -0.07
HERPUD1-201ENST00000300302 OR2W5A6NFC9 320 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 D6RAR5 112 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 J3KTA2 159 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 FLRT2O43155 660 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 FCMRO60667 390 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 TNFAIP8O95379 198 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 LGI1O95970 557 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 GP1BAP07359 652 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 PRKAR1BP31321 381 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 GABRA3P34903 492 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 MAP3K8P41279 467 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 PGDP52209 483 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 POU6F2P78424 691 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 ADARB1P78563 741 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 TRA2AQ13595 282 aaKnown RBP eCLIP14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 LAPTM4AQ15012 233 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 PLA2G2CQ5R387 149 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 DBX2Q6ZNG2 339 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 ZNF605Q86T29 641 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 BPHLQ86WA6 291 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 ATG16L2Q8NAA4 619 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 OR52P1PQ8NH57 321 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 GIPC3Q8TF64 312 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 PMM1Q92871 262 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 FKBP10Q96AY3 582 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 BARD1Q99728 777 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 LMF2Q9BU23 707 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 CNPPD1Q9BV87 410 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 QRSL1Q9H0R6 528 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 PNPLA3Q9NST1 481 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 KLHL28Q9NXS3 571 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 KCND3Q9UK17 655 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 MKLN1Q9UL63 735 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 HEMK1Q9Y5R4 338 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 TTC28Q96AY4 2481 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 SYNDIG1LA6NDD5 238 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 EIF4E1BA6NMX2 242 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 NTN3O00634 580 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 NKX2-2O95096 273 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 HBQ1P09105 142 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 GNAO1P09471 354 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 SSTR4P31391 388 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 EMDP50402 254 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 HMGA2P52926 109 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 SMIM11AP58511 58 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 FUT7Q11130 342 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 LARS2Q15031 903 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 COLEC12Q5KU26 742 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 KDM4DQ6B0I6 523 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 TYW3Q6IPR3 259 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 DEF8Q6ZN54 512 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 SLITRK4Q8IW52 837 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 TAGAPQ8N103 731 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 OR52J3Q8NH60 311 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 PIK3R3Q92569 461 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 RSPO3Q9BXY4 272 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 ZNF350Q9GZX5 532 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 FOLH1BQ9HBA9 442 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 POLE3Q9NRF9 147 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 ACER3Q9NUN7 267 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 TMEFF2Q9UIK5 374 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 ERVK-19Q9WJR5 959 aa14.63□□□□□ -0.07
HERPUD1-201ENST00000300302 LNP1A1A4G5 178 aa14.62□□□□□ -0.07
HERPUD1-201ENST00000300302 TTC36A6NLP5 189 aa14.62□□□□□ -0.07
HERPUD1-201ENST00000300302 C17orf105B2RV13 164 aa14.62□□□□□ -0.07
HERPUD1-201ENST00000300302 HYAL3O43820 417 aaPredicted RBP14.62□□□□□ -0.07
HERPUD1-201ENST00000300302 SCRG1O75711 98 aa14.62□□□□□ -0.07
HERPUD1-201ENST00000300302 CSTF2P33240 577 aaKnown RBP eCLIP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms