RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SDF2Q99470 211 aa21.29■■□□□ 1
PTX3-201ENST00000295927 WFDC6Q9BQY6 131 aa21.29■■□□□ 1
PTX3-201ENST00000295927 TMEFF2Q9UIK5 374 aaPredicted RBP21.29■■□□□ 1
PTX3-201ENST00000295927 MKLN1Q9UL63 735 aa21.29■■□□□ 1
PTX3-201ENST00000295927 PCDHGB2Q9Y5G2 931 aa21.29■■□□□ 1
PTX3-201ENST00000295927 SPEGQ15772 3267 aa21.29■■□□□ 1
PTX3-201ENST00000295927 D6RAR5 112 aa21.28■■□□□ 1
PTX3-201ENST00000295927 TNFRSF11BO00300 401 aa21.28■■□□□ 1
PTX3-201ENST00000295927 LDOC1O95751 146 aaPredicted RBP21.28■■□□□ 1
PTX3-201ENST00000295927 EPPINO95925 133 aa21.28■■□□□ 1
PTX3-201ENST00000295927 ALBP02768 609 aa21.28■■□□□ 1
PTX3-201ENST00000295927 GNAO1P09471 354 aa21.28■■□□□ 1
PTX3-201ENST00000295927 PABPC4LP0CB38 370 aaKnown RBP21.28■■□□□ 1
PTX3-201ENST00000295927 CHN2P52757 468 aa21.28■■□□□ 1
PTX3-201ENST00000295927 CDH12P55289 794 aa21.28■■□□□ 1
PTX3-201ENST00000295927 ADARB1P78563 741 aaKnown RBP21.28■■□□□ 1
PTX3-201ENST00000295927 RHBDD2Q6NTF9 364 aa21.28■■□□□ 1
PTX3-201ENST00000295927 ZNF605Q86T29 641 aa21.28■■□□□ 1
PTX3-201ENST00000295927 COX18Q8N8Q8 333 aa21.28■■□□□ 1
PTX3-201ENST00000295927 CHDHQ8NE62 594 aaPredicted RBP21.28■■□□□ 1
PTX3-201ENST00000295927 VANGL1Q8TAA9 524 aaPredicted RBP21.28■■□□□ 1
PTX3-201ENST00000295927 GPR151Q8TDV0 419 aa21.28■■□□□ 1
PTX3-201ENST00000295927 HOXB13Q92826 284 aaPredicted RBP21.28■■□□□ 1
PTX3-201ENST00000295927 ATOH1Q92858 354 aaPredicted RBP21.28■■□□□ 1
PTX3-201ENST00000295927 PELOQ9BRX2 385 aaKnown RBP21.28■■□□□ 1
PTX3-201ENST00000295927 PINK1Q9BXM7 581 aa21.28■■□□□ 1
PTX3-201ENST00000295927 SLC7A5P2Q9GIP4 190 aa21.28■■□□□ 1
PTX3-201ENST00000295927 SIDT1Q9NXL6 827 aaKnown RBP21.28■■□□□ 1
PTX3-201ENST00000295927 RARRES3Q9UL19 164 aa21.28■■□□□ 1
PTX3-201ENST00000295927 WDR45Q9Y484 360 aa21.28■■□□□ 1
PTX3-201ENST00000295927 GALNSP34059 522 aa21.27■■□□□ 1
PTX3-201ENST00000295927 EMDP50402 254 aa21.27■■□□□ 1
PTX3-201ENST00000295927 MINDY4Q4G0A6 757 aa21.27■■□□□ 1
PTX3-201ENST00000295927 VWA2Q5GFL6 755 aa21.27■■□□□ 1
PTX3-201ENST00000295927 ZNF311Q5JNZ3 666 aa21.27■■□□□ 1
PTX3-201ENST00000295927 CCNJQ5T5M9 372 aa21.27■■□□□ 1
PTX3-201ENST00000295927 TYW3Q6IPR3 259 aaKnown RBP21.27■■□□□ 1
PTX3-201ENST00000295927 QSOX2Q6ZRP7 698 aa21.27■■□□□ 1
PTX3-201ENST00000295927 RBM45Q8IUH3 476 aaKnown RBP21.27■■□□□ 1
PTX3-201ENST00000295927 LACC1Q8IV20 430 aa21.27■■□□□ 1
PTX3-201ENST00000295927 CNPPD1Q9BV87 410 aa21.27■■□□□ 1
PTX3-201ENST00000295927 TOR3AQ9H497 397 aa21.27■■□□□ 1
PTX3-201ENST00000295927 SATB2Q9UPW6 733 aa21.27■■□□□ 1
PTX3-201ENST00000295927 TIAF1O95411 115 aa21.27■■□□□ 1
PTX3-201ENST00000295927 LGI1O95970 557 aa21.27■■□□□ 1
PTX3-201ENST00000295927 GABRA3P34903 492 aa21.27■■□□□ 1
PTX3-201ENST00000295927 DAPP51397 102 aa21.27■■□□□ 1
PTX3-201ENST00000295927 PGDP52209 483 aa21.27■■□□□ 1
PTX3-201ENST00000295927 GANABQ14697 944 aaKnown RBP21.27■■□□□ 1
PTX3-201ENST00000295927 DCST2Q5T1A1 773 aa21.27■■□□□ 1
PTX3-201ENST00000295927 CYP4Z1Q86W10 505 aa21.27■■□□□ 1
PTX3-201ENST00000295927 VRK2Q86Y07 508 aa21.27■■□□□ 1
PTX3-201ENST00000295927 OR4C15Q8NGM1 316 aa21.27■■□□□ 1
PTX3-201ENST00000295927 OR52J3Q8NH60 311 aa21.27■■□□□ 1
PTX3-201ENST00000295927 FBXL20Q96IG2 436 aa21.27■■□□□ 1
PTX3-201ENST00000295927 MTHFD2LQ9H903 347 aaPredicted RBP21.27■■□□□ 1
PTX3-201ENST00000295927 FOLH1BQ9HBA9 442 aa21.27■■□□□ 1
PTX3-201ENST00000295927 ERVK-19Q9WJR5 959 aa21.27■■□□□ 1
PTX3-201ENST00000295927 HEMK1Q9Y5R4 338 aaPredicted RBP21.27■■□□□ 1
PTX3-201ENST00000295927 M0R3H8 397 aa21.26■□□□□ 0.99
PTX3-201ENST00000295927 NKX2-2O95096 273 aa21.26■□□□□ 0.99
PTX3-201ENST00000295927 TNNI3P19429 210 aa21.26■□□□□ 0.99
PTX3-201ENST00000295927 PWWP2BQ6NUJ5 590 aa21.26■□□□□ 0.99
PTX3-201ENST00000295927 TCTN3Q6NUS6 607 aa21.26■□□□□ 0.99
PTX3-201ENST00000295927 RHBDD1Q8TEB9 315 aa21.26■□□□□ 0.99
PTX3-201ENST00000295927 TSLPQ969D9 159 aa21.26■□□□□ 0.99
PTX3-201ENST00000295927 ZNF578Q96N58 590 aaPredicted RBP21.26■□□□□ 0.99
PTX3-201ENST00000295927 MBOAT4Q96T53 435 aa21.26■□□□□ 0.99
PTX3-201ENST00000295927 LMF2Q9BU23 707 aaKnown RBP21.26■□□□□ 0.99
PTX3-201ENST00000295927 ZNF350Q9GZX5 532 aa21.26■□□□□ 0.99
PTX3-201ENST00000295927 ACER3Q9NUN7 267 aa21.26■□□□□ 0.99
PTX3-201ENST00000295927 IGKV3D-11A0A0A0MRZ8 115 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 GXYLT2A0PJZ3 443 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 H0YAE9 185 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 FFAR1O14842 300 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 SEMA7AO75326 666 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 CLIC3O95833 236 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 MYF6P23409 242 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 EFNA3P52797 238 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 RHAGQ02094 409 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 FUT7Q11130 342 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 BLMHQ13867 455 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 DEF8Q6ZN54 512 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 SLC38A9Q8NBW4 561 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 OR52P1PQ8NH57 321 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 MKKSQ9NPJ1 570 aaPredicted RBP21.25■□□□□ 0.99
PTX3-201ENST00000295927 OCIAD1Q9NX40 245 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 RHCGQ9UBD6 479 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 FTSJ1Q9UET6 329 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 SLC9A8Q9Y2E8 581 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 COL5A1P20908 1838 aaPredicted RBP21.25■□□□□ 0.99
PTX3-201ENST00000295927 FLRT2O43155 660 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 PRAMEF2O60811 474 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 SCRG1O75711 98 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 FUT4P22083 530 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 IGFBP5P24593 272 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 ACP1P24666 158 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 POU6F2P78424 691 aaPredicted RBP21.25■□□□□ 0.99
PTX3-201ENST00000295927 MYBPC1Q00872 1141 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 PSG6Q00889 435 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms