RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 UBL4AP11441 157 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 FNTBP49356 437 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 GLT8D1Q68CQ7 371 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 KCTD11Q693B1 232 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 WFDC5Q8TCV5 224 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 MCTS1Q9ULC4 181 aaKnown RBP16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 SLC35A3Q9Y2D2 325 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 KCNAB2Q13303 367 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 C6orf132Q5T0Z8 1188 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 DCBLD2Q96PD2 775 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 ACPTQ9BZG2 426 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 ENPP4Q9Y6X5 453 aa16.74■□□□□ 0.27
CDC42EP3-201ENST00000295324 HMGN2P05204 90 aaKnown RBP16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 HSD17B1P14061 328 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 ENTPD1P49961 510 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 CARTPTQ16568 116 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 RNF220Q5VTB9 566 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 BCL7CQ8WUZ0 217 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 NXPE2Q96DL1 559 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 SLC41A3Q96GZ6 507 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 TMEM41AQ96HV5 264 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 SLAMF7Q9NQ25 335 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 ADAM29Q9UKF5 820 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 CD46P15529 392 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 GGT1P19440 569 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 TLE3Q04726 772 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 MAD2L1BPQ15013 274 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 OCLNQ16625 522 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 PRR22Q8IZ63 422 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 NAGSQ8N159 534 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 PMM1Q92871 262 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 MED28Q9H204 178 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 FGF21Q9NSA1 209 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 PTBP2Q9UKA9 531 aaKnown RBP16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 H3BSH0 61 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 SIGLEC6O43699 453 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 THOC7Q6I9Y2 204 aaKnown RBP16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 OR4K5Q8NGD3 323 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 CIDECQ96AQ7 238 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 SORBS1Q9BX66 1292 aaKnown RBP16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 SLC6A17Q9H1V8 727 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 ZNF639Q9UID6 485 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 FBXO9Q9UK97 447 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 PMF1-BGLAPU3KQ54 211 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 A6NLC8 198 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 FOXE1O00358 373 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 ZDHHC11BP0C7U3 371 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 GLP1RP43220 463 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 OR1D4P47884 311 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 RAB39AQ14964 217 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 MEMO1Q9Y316 297 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 TRBV11-1A0A0K0K1C0 115 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 H0YAE9 185 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 DCDP81605 110 aaKnown RBP16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 DMWDQ09019 674 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 MANEAQ5SRI9 462 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 ZER1Q7Z7L7 766 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 SLC44A3Q8N4M1 653 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 ACOT12Q8WYK0 555 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 ZNF224Q9NZL3 707 aa16.73■□□□□ 0.27
CDC42EP3-201ENST00000295324 ADAP00813 363 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 PRDX3P30048 256 aaKnown RBP16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 SFTPDP35247 375 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 RFLNAQ6ZTI6 216 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 OR52R1Q8NGF1 315 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 KHSRPQ92945 711 aaKnown RBP eCLIP16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 PITX2Q99697 317 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 DCSTAMPQ9H295 470 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 RXFP3Q9NSD7 469 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 RBMX2Q9Y388 322 aaKnown RBP16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 PCDHGB6Q9Y5F9 930 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 TCRBV5S1A1TA0A578 114 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 GRXCR2A6NFK2 248 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 TLCD2A6NGC4 264 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 ORC5O43913 435 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 ERCC1P07992 297 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 NAA10P41227 235 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 GPR4P46093 362 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 ADPRHP54922 357 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 FOXA1P55317 472 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 BLMHQ13867 455 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 PRAMEF8Q5VWM4 474 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 PRAMEF7Q5VXH5 474 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 UBE2Q1Q7Z7E8 422 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 NINJ1Q92982 152 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 TBC1D24Q9ULP9 559 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 SCN9AQ15858 1988 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 CHP2O43745 196 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 ATE1O95260 518 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 CPMP14384 443 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 CEACAM7Q14002 265 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 MAL2Q969L2 176 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 BORCS8Q96FH0 119 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 CCDC115Q96NT0 180 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 SECISBP2Q96T21 854 aaKnown RBP16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 KCND3Q9UK17 655 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 PHYHO14832 338 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 FLRT2O43155 660 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 JRKO75564 520 aa16.72■□□□□ 0.27
CDC42EP3-201ENST00000295324 MMP2P08253 660 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms