RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 M0R296 226 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 MATN4O95460 622 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 CD1DP15813 335 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 P2RY2P41231 377 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 CBX5P45973 191 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 MLLT10P55197 1068 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 BLOC1S1P78537 153 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 ACY1Q03154 408 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 MAD2L1BPQ15013 274 aaPredicted RBP10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 RHEBQ15382 184 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 CLDN19Q8N6F1 224 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 OR51G2Q8NGK0 314 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 TGM7Q96PF1 710 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 DOHHQ9BU89 302 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 ZDHHC5Q9C0B5 715 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 OR10A4Q9H209 315 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 POT1Q9NUX5 634 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 FBXW2Q9UKT8 454 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 TRIM64A6NGJ6 449 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 TRIM64BA6NI03 449 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 GMDSO60547 372 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 KLKB1P03952 638 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 DDCP20711 480 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 EIF2S3P41091 472 aaKnown RBP10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 RPS15P62841 145 aaKnown RBP10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 PRKCDQ05655 676 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 IRF4Q15306 451 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 ZNF630Q2M218 657 aaPredicted RBP10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 FLYWCH1Q4VC44 716 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 KRBOX4Q5JUW0 171 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 CEACAM20Q6UY09 585 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 PLPP6Q8IY26 295 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 FBXO15Q8NCQ5 510 aaPredicted RBP10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 ZNF700Q9H0M5 742 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 OR51I1Q9H343 314 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 METTL8Q9H825 291 aaKnown RBP10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 IL21Q9HBE4 155 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 EPHA6Q9UF33 1036 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 SLC22A14Q9Y267 594 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 HS3ST3A1Q9Y663 406 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 OR1I1O60431 355 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 SCN2BO60939 215 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 SPARCP09486 303 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 BPIP17213 487 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 SMN1Q16637 294 aaKnown RBP10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 RAB6CQ53S08 254 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 GTF2IRD2BQ6EKJ0 949 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 UNC5DQ6UXZ4 953 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 LIPIQ6XZB0 460 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 GTF2IRD2Q86UP8 949 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 NUDT13Q86X67 352 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 LYSMD2Q8IV50 215 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 PRSS58Q8IYP2 241 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 OR2L3Q8NG85 312 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 FCAMRQ8WWV6 532 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 ZBED6CLQ96FA7 236 aaPredicted RBP10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 CMTM7Q96FZ5 175 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 DPH2Q9BQC3 489 aaPredicted RBP10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 YIPF4Q9BSR8 244 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 ZNF436Q9C0F3 470 aaPredicted RBP10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 RAB6CQ9H0N0 254 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 OR51J1Q9H342 316 aa10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 GMPR2Q9P2T1 348 aaKnown RBP10.79□□□□□ -0.68
NPC1L1-201ENST00000289547 ELOA3DA6NLF2 546 aaPredicted RBP10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 SPDEFO95238 335 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 RPS5P46782 204 aaKnown RBP10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 TFF2Q03403 129 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 KCNC4Q03721 635 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 ELOA3BQ3SY89 546 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 FAM205BPQ63HN1 556 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 HSDL2Q6YN16 418 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 C3P1Q6ZMU1 363 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 RANBP3LQ86VV4 465 aaPredicted RBP10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 SLC5A8Q8N695 610 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 ELOA3Q8NG57 546 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 TCTEX1D2Q8WW35 142 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 RGMAQ96B86 450 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 B3GNT4Q9C0J1 378 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 CALML5Q9NZT1 146 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 SH2B3Q9UQQ2 575 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 PCDHGB1Q9Y5G3 927 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 PRKYO43930 277 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 MRPS14O60783 128 aaKnown RBP10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 TGFB1P01137 390 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 ALDOBP05062 364 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 JUNP05412 331 aaKnown RBP10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 PTPN6P29350 595 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 PKLRP30613 574 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 CTBP2P56545 445 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 DMWDQ09019 674 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 SLBPQ14493 270 aaKnown RBP eCLIP10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 SEC23BQ15437 767 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 SMAD2Q15796 467 aaKnown RBP10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 KLHL26Q53HC5 615 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 GDPGP1Q6ZNW5 385 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 VASH1Q7L8A9 365 aaPredicted RBP10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 SMRP1Q8NCR6 262 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 OR2A12Q8NGT7 310 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 TRIB3Q96RU7 358 aa10.78□□□□□ -0.68
NPC1L1-201ENST00000289547 IL21RQ9HBE5 538 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms