RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 LCE2AQ5TA79 106 aaPredicted RBP8.41□□□□□ -1.06
HMGN1-201ENST00000288344 IL23RQ5VWK5 629 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 SLC22A10Q63ZE4 541 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 ANKRD26P1Q6NSI1 321 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 SLC29A4Q7RTT9 530 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 ZNF551Q7Z340 670 aaPredicted RBP8.41□□□□□ -1.06
HMGN1-201ENST00000288344 WDR75Q8IWA0 830 aaKnown RBP8.41□□□□□ -1.06
HMGN1-201ENST00000288344 DND1Q8IYX4 353 aaKnown RBP8.41□□□□□ -1.06
HMGN1-201ENST00000288344 POGLUT1Q8NBL1 392 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 OR10G3Q8NGC4 313 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 OR52N2Q8NGI0 321 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 FAM110BQ8TC76 370 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 SPPL2AQ8TCT8 520 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 SREK1Q8WXA9 508 aaKnown RBP8.41□□□□□ -1.06
HMGN1-201ENST00000288344 ASB15Q8WXK1 588 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 ZNF75CPQ92670 426 aaPredicted RBP8.41□□□□□ -1.06
HMGN1-201ENST00000288344 CIDECQ96AQ7 238 aaPredicted RBP8.41□□□□□ -1.06
HMGN1-201ENST00000288344 HSPBAP1Q96EW2 488 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 LCORQ96JN0 433 aaPredicted RBP8.41□□□□□ -1.06
HMGN1-201ENST00000288344 ATP6V1G3Q96LB4 118 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 TSSK3Q96PN8 268 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 ITPAQ9BY32 194 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 ANGPTL4Q9BY76 406 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 STMN4Q9H169 189 aaPredicted RBP8.41□□□□□ -1.06
HMGN1-201ENST00000288344 UBQLN3Q9H347 655 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 CENPHQ9H3R5 247 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 MANSC1Q9H8J5 431 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 HPF1Q9NWY4 346 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 VPS4AQ9UN37 437 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 KLF13Q9Y2Y9 288 aaPredicted RBP8.41□□□□□ -1.06
HMGN1-201ENST00000288344 FIS1Q9Y3D6 152 aa8.41□□□□□ -1.06
HMGN1-201ENST00000288344 FRG2CA6NGY1 282 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 KLRC4-KLRK1H3BQV0 150 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 SCAMP2O15127 329 aaKnown RBP8.4□□□□□ -1.06
HMGN1-201ENST00000288344 ACOX3O15254 700 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 DYRK3O43781 588 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 UGT2B11O75310 529 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 CRCPO75575 148 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 BCAS2O75934 225 aaPredicted RBP8.4□□□□□ -1.06
HMGN1-201ENST00000288344 CHEK2O96017 543 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 ALDOCP09972 364 aaKnown RBP8.4□□□□□ -1.06
HMGN1-201ENST00000288344 RFPL3SP0C7P2 107 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 PRPS2P11908 318 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 PIGAP37287 484 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 CASP3P42574 277 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 ASMTP46597 345 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 CDK9P50750 372 aaKnown RBP8.4□□□□□ -1.06
HMGN1-201ENST00000288344 CORO7P57737 925 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 FBXW4P57775 412 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 KCNK10P57789 538 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 GPR85P60893 370 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 DCAF7P61962 342 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 GAB1Q13480 694 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 EMC4Q5J8M3 183 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 FAM180AQ6UWF9 173 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 HDXQ7Z353 690 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 NUP54Q7Z3B4 507 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 FBXW8Q8N3Y1 598 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 FAM26EQ8N5C1 309 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 KRTCAP2Q8N6L1 136 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 ANKRD42Q8N9B4 389 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 OR7A2PQ8NGA2 310 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 OR4N2Q8NGD1 307 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 CLHC1Q8NHS4 586 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 GFM2Q969S9 779 aaKnown RBP8.4□□□□□ -1.06
HMGN1-201ENST00000288344 SLC35A4Q96G79 324 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 TEX37Q96LM6 180 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 C5orf34Q96MH7 638 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 NODALQ96S42 347 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 LMF2Q9BU23 707 aaKnown RBP8.4□□□□□ -1.06
HMGN1-201ENST00000288344 BRINP2Q9C0B6 783 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 IL1RL2Q9HB29 575 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 FOLH1BQ9HBA9 442 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 TUBA8Q9NY65 449 aaPredicted RBP8.4□□□□□ -1.06
HMGN1-201ENST00000288344 CNIH4Q9P003 139 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 CFL2Q9Y281 166 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 GPR45Q9Y5Y3 372 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 UNC79Q9P2D8 2635 aa8.4□□□□□ -1.06
HMGN1-201ENST00000288344 OR6C70A6NIJ9 312 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 HDAC3O15379 428 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 ZNHIT1O43257 154 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 SKAP2O75563 359 aaPredicted RBP8.39□□□□□ -1.07
HMGN1-201ENST00000288344 PPM1BO75688 479 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 LRATO95237 230 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 HSPA4LO95757 839 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 PRPS1L1P21108 318 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 ENDOUP21128 410 aaKnown RBP8.39□□□□□ -1.07
HMGN1-201ENST00000288344 IL12AP29459 219 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 MC3RP41968 323 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 DNASE1L1P49184 302 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 MAN2A2P49641 1150 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 NCBP2P52298 156 aaKnown RBP eCLIP8.39□□□□□ -1.07
HMGN1-201ENST00000288344 ALDH6A1Q02252 535 aaKnown RBP8.39□□□□□ -1.07
HMGN1-201ENST00000288344 GALNTL6Q49A17 601 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 ATP6AP1LQ52LC2 224 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 HHATQ5VTY9 493 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 BICRALQ6AI39 1079 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 DDIASQ8IXT1 998 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 FAM9CQ8IZT9 166 aa8.39□□□□□ -1.07
HMGN1-201ENST00000288344 LIX1Q8N485 282 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms