RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SELENOWP63302 87 aa15.64■□□□□ 0.09
SH3RF1-201ENST00000284637 DBPQ10586 325 aaPredicted RBP15.64■□□□□ 0.09
SH3RF1-201ENST00000284637 TBCEQ15813 527 aaPredicted RBP15.64■□□□□ 0.09
SH3RF1-201ENST00000284637 ZNF283Q8N7M2 679 aa15.64■□□□□ 0.09
SH3RF1-201ENST00000284637 MMABQ96EY8 250 aaPredicted RBP15.64■□□□□ 0.09
SH3RF1-201ENST00000284637 METTL7AQ9H8H3 244 aa15.64■□□□□ 0.09
SH3RF1-201ENST00000284637 EEF1E1-BLOC1S5C9J1V9 151 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 EIF3FO00303 357 aaPredicted RBP15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 POLR1CO15160 346 aaPredicted RBP15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 ARPC5O15511 151 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 ADAM23O75077 832 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 FARS2O95363 451 aaKnown RBP15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 HOXB2P14652 356 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 PRKCAP17252 672 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 RGS6P49758 472 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 TPMTP51580 245 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 KRBOX4Q5JUW0 171 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 C12orf40Q86WS4 652 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 SLC5A7Q9GZV3 580 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 TMEM184CQ9NVA4 438 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 CITO14578 2027 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 LMO7Q8WWI1 1683 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 SULT1C4O75897 302 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 FGF18O76093 207 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 TRIM23P36406 574 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 MC2RQ01718 297 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 GPM6BQ13491 265 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 ZNF691Q5VV52 312 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 PIANPQ8IYJ0 282 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 LRRC25Q8N386 305 aaPredicted RBP15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 MS4A15Q8N5U1 240 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 MFSD8Q8NHS3 518 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 SLC25A44Q96H78 314 aaPredicted RBP15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 C7orf50Q9BRJ6 194 aaKnown RBP15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 LRRTM2O43300 516 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 PFKMP08237 780 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 UCHL1P09936 223 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 TRAPPC2P0DI81 140 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 TRAPPC2BP0DI82 140 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 GRAMD2AQ8IUY3 354 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 SYT14Q8NB59 555 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 ANKK1Q8NFD2 765 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 RPL3LQ92901 407 aaKnown RBP15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 SLC39A13Q96H72 371 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 SPHK2Q9NRA0 654 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 IGKV6D-21A0A0A0MT36 114 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 C21orf33P30042 268 aaPredicted RBP15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 MAGEA6P43360 314 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 CHRDL2Q6WN34 429 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 LRRTM3Q86VH5 581 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 B3GNT7Q8NFL0 401 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 CNOT9Q92600 299 aaKnown RBP15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 WASH6PQ9NQA3 447 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 CNIH4Q9P003 139 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 INSL6Q9Y581 213 aa15.63■□□□□ 0.09
SH3RF1-201ENST00000284637 STMND1H3BQB6 276 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 MUSKO15146 869 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 PLGP00747 810 aaPredicted RBP15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 H2BFMP0C1H6 154 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 ADORA3P0DMS8 318 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 TUBG1P23258 451 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 PTH2RP49190 550 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 DEFA6Q01524 100 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 METTL11BQ5VVY1 283 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 CNKSR3Q6P9H4 555 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 CHFRQ96EP1 664 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 CNN2Q99439 309 aaKnown RBP15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 PRTFDC1Q9NRG1 225 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 RXFP3Q9NSD7 469 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 TEX10Q9NXF1 929 aaPredicted RBP15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 GPR45Q9Y5Y3 372 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 LOC105369274A0A096LPK9 316 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 PRAF2O60831 178 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 DDCP20711 480 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 SPINT3P49223 89 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 ART1P52961 327 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 WNT4P56705 351 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 HES5Q5TA89 166 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 IDO2Q6ZQW0 420 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 TTLL10Q6ZVT0 673 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 OR4N4Q8N0Y3 316 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 GTPBP8Q8N3Z3 284 aaPredicted RBP15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 TMEM156Q8N614 296 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 TSTD1Q8NFU3 115 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 ADAMTS19Q8TE59 1207 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 NEURL2Q9BR09 285 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 SLC12A9Q9BXP2 914 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 SLAMF8Q9P0V8 285 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 RPS17P08708 135 aaKnown RBP15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 PET100P0DJ07 73 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 ITGAMP11215 1152 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 GNSP15586 552 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 TAS2R38P59533 333 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 ACTA2P62736 377 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 ACTG2P63267 376 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 CHRFAM7AQ494W8 412 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 PLAG1Q6DJT9 500 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 KDELC1Q6UW63 502 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 TTC9BQ8N6N2 239 aa15.62■□□□□ 0.09
SH3RF1-201ENST00000284637 TRMT10AQ8TBZ6 339 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms