RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 TO15178 435 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 ABCB7O75027 752 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 IL18BPO95998 194 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 RAF1P04049 648 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 SBK3P0C264 359 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 EPXP11678 715 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 CHN1P15882 459 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 DRD5P21918 477 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 CPOXP36551 454 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 HSD17B3P37058 310 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 HTR6P50406 440 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 HMGCS1Q01581 520 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 ACSM2AQ08AH3 577 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 ZNF155Q12901 538 aaPredicted RBP11.6□□□□□ -0.55
CD44-203ENST00000278386 FOXF2Q12947 444 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 FOXD4Q12950 439 aaPredicted RBP11.6□□□□□ -0.55
CD44-203ENST00000278386 KEAP1Q14145 624 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 EFR3AQ14156 821 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 POU4F3Q15319 338 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 SPIN4Q56A73 249 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 ZNF678Q5SXM1 525 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 LGSNQ5TDP6 509 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 ACSM2BQ68CK6 577 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 AAGABQ6PD74 315 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 SCIMPQ6UWF3 145 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 PLXDC2Q6UX71 529 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 LARP4Q71RC2 724 aaKnown RBP eCLIP11.6□□□□□ -0.55
CD44-203ENST00000278386 P4HA3Q7Z4N8 544 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 PLCZ1Q86YW0 608 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 GRAMD2AQ8IUY3 354 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 TRIM42Q8IWZ5 723 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 FAM9CQ8IZT9 166 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 MMGT1Q8N4V1 131 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 WDSUB1Q8N9V3 476 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 NOA1Q8NC60 698 aaKnown RBP11.6□□□□□ -0.55
CD44-203ENST00000278386 METTL6Q8TCB7 284 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 INTS12Q96CB8 462 aaKnown RBP11.6□□□□□ -0.55
CD44-203ENST00000278386 NTNG2Q96CW9 530 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 ZNF681Q96N22 645 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 ZFP3Q96NJ6 502 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 BTBD9Q96Q07 612 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 ADOQ96SZ5 270 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 TM9SF2Q99805 663 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 ACPTQ9BZG2 426 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 ACBD3Q9H3P7 528 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 GALNT8Q9NY28 637 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 TAS2R10Q9NYW0 307 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 FETUBQ9UGM5 382 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 FBXL2Q9UKC9 423 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 STK38LQ9Y2H1 464 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 OR10H1Q9Y4A9 318 aa11.6□□□□□ -0.55
CD44-203ENST00000278386 ULK1O75385 1050 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 NME6O75414 186 aaPredicted RBP11.59□□□□□ -0.55
CD44-203ENST00000278386 DRD2P14416 443 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 CPN1P15169 458 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 ECHS1P30084 290 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 SRD5A2P31213 254 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 TIA1P31483 386 aaKnown RBP eCLIP11.59□□□□□ -0.55
CD44-203ENST00000278386 CORO7P57737 925 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 BTKQ06187 659 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 HEPACAMQ14CZ8 416 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 DAZAP2Q15038 168 aaPredicted RBP11.59□□□□□ -0.55
CD44-203ENST00000278386 UNC50Q53HI1 259 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 OR5M10Q6IEU7 315 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 NPSR1Q6W5P4 371 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 CAMKMTQ7Z624 323 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 SLC44A2Q8IWA5 706 aaPredicted RBP11.59□□□□□ -0.55
CD44-203ENST00000278386 SAMD14Q8IZD0 417 aaPredicted RBP11.59□□□□□ -0.55
CD44-203ENST00000278386 MNS1Q8NEH6 495 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 OR4K17Q8NGC6 315 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 EFHD2Q96C19 240 aaPredicted RBP11.59□□□□□ -0.55
CD44-203ENST00000278386 MTBPQ96DY7 904 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 SLC35A4Q96G79 324 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 BBS4Q96RK4 519 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 FOLH1BQ9HBA9 442 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 JKAMPQ9P055 326 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 TMEM216Q9P0N5 145 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 CLCF1Q9UBD9 225 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 NFU1Q9UMS0 254 aa11.59□□□□□ -0.55
CD44-203ENST00000278386 RPH3AQ9Y2J0 694 aaPredicted RBP11.59□□□□□ -0.55
CD44-203ENST00000278386 GPR55Q9Y2T6 319 aaPredicted RBP11.59□□□□□ -0.55
CD44-203ENST00000278386 CCDC151A5D8V7 595 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 PLOD2O00469 737 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 SCO2O43819 266 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 DLX3O60479 287 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 COQ9O75208 318 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 RCBTB2O95199 551 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 ATE1O95260 518 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 CTAGE8P0CG41 777 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 CT45A8P0DMV1 189 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 CT45A9P0DMV2 189 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 ATP5F1P24539 256 aaPredicted RBP11.58□□□□□ -0.56
CD44-203ENST00000278386 GRK2P25098 689 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 STARP49675 285 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 LHX2P50458 406 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 DIO3P55073 304 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 GFRA1P56159 465 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 RAE1P78406 368 aaKnown RBP11.58□□□□□ -0.56
CD44-203ENST00000278386 MRPS22P82650 360 aaKnown RBP11.58□□□□□ -0.56
CD44-203ENST00000278386 LCP2Q13094 533 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms