RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 TRIM45Q9H8W5 580 aaPredicted RBP14.33□□□□□ -0.11
COPS3-201ENST00000268717 PRTFDC1Q9NRG1 225 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 TMEM9Q9P0T7 183 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 TMEFF2Q9UIK5 374 aaPredicted RBP14.33□□□□□ -0.11
COPS3-201ENST00000268717 SERTAD3Q9UJW9 196 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 FAM32AQ9Y421 112 aaKnown RBP14.33□□□□□ -0.11
COPS3-201ENST00000268717 MMACHCQ9Y4U1 282 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 MAGED1Q9Y5V3 778 aaPredicted RBP14.33□□□□□ -0.11
COPS3-201ENST00000268717 LYVE1Q9Y5Y7 322 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 SYNDIG1LA6NDD5 238 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 ARRDC5A6NEK1 342 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 OR10H2O60403 315 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 H6PDO95479 791 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 ITGAMP11215 1152 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 CDH2P19022 906 aaPredicted RBP14.33□□□□□ -0.12
COPS3-201ENST00000268717 RRM2P31350 389 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 STT3AP46977 705 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 SEPHS1P49903 392 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 RPS6KA3P51812 740 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 HPCAP84074 193 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 STX4Q12846 297 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 KCNAB1Q14722 419 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 ARHGAP11BQ3KRB8 267 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 TRMT12Q53H54 448 aaKnown RBP14.33□□□□□ -0.12
COPS3-201ENST00000268717 GUSBP11Q6P575 273 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 C16orf62Q7Z3J2 963 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 APLFQ8IW19 511 aaPredicted RBP14.33□□□□□ -0.12
COPS3-201ENST00000268717 GALNT12Q8IXK2 581 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 VWA5B2Q8N398 1253 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 GALNT15Q8N3T1 639 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 OR4C15Q8NGM1 316 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 OR51Q1Q8NH59 317 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 OR1L3Q8NH93 324 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 CYGBQ8WWM9 190 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 ZNF501Q96CX3 271 aaPredicted RBP14.33□□□□□ -0.12
COPS3-201ENST00000268717 PEX11GQ96HA9 241 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 NUDT22Q9BRQ3 303 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 YIPF4Q9BSR8 244 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 CXorf21Q9HAI6 301 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 EQTNQ9NQ60 294 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 SH3GLB1Q9Y371 365 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 U3KQV3 271 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 SPTBP11277 2137 aa14.33□□□□□ -0.12
COPS3-201ENST00000268717 FREM2Q5SZK8 3169 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 UNC13CQ8NB66 2214 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 TNFRSF11BO00300 401 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 JRKO75564 520 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 DIRAS1O95057 198 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 IGFBP5P24593 272 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 LIMS1P48059 325 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 DUSP3P51452 185 aaPredicted RBP14.32□□□□□ -0.12
COPS3-201ENST00000268717 ID2Q02363 134 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 ACY1Q03154 408 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 SLC13A2Q13183 592 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 IL18R1Q13478 541 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 DSG2Q14126 1118 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 GPAT3Q53EU6 434 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 DHRS4L2Q6PKH6 230 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 ARHGAP22Q7Z5H3 698 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 CYP4Z1Q86W10 505 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 HS3ST5Q8IZT8 346 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 SLC16A11Q8NCK7 471 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 NR4A3Q92570 626 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 SLC35A4Q96G79 324 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 DHRS1Q96LJ7 313 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 NDC1Q9BTX1 674 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 TOR3AQ9H497 397 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 SMURF2Q9HAU4 748 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 POLE3Q9NRF9 147 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 ACAD8Q9UKU7 415 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 SRPK3Q9UPE1 567 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 SLC9A8Q9Y2E8 581 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 IFT52Q9Y366 437 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 CLDN16Q9Y5I7 305 aa14.32□□□□□ -0.12
COPS3-201ENST00000268717 USP24Q9UPU5 2620 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 TTC36A6NLP5 189 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 C1QTNF9BB2RNN3 333 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 DSCR3O14972 297 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 SLC16A6O15403 523 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 HS6ST1O60243 411 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 LGI1O95970 557 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 ALOX5P09917 674 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 C1QTNF9P0C862 333 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 ACP2P11117 423 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 FOLR1P15328 257 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 PRKAR1BP31321 381 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 OR1E2P47887 323 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 MYBPC1Q00872 1141 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 SPIBQ01892 262 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 PERM1Q5SV97 790 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 UNQ6494/PRO21346Q6UXR6 183 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 TMPRSS12Q86WS5 348 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 PIK3C3Q8NEB9 887 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 ZNF555Q8NEP9 628 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 RBM18Q96H35 190 aaKnown RBP14.31□□□□□ -0.12
COPS3-201ENST00000268717 YTHDF1Q9BYJ9 559 aaKnown RBP14.31□□□□□ -0.12
COPS3-201ENST00000268717 LRRN3Q9H3W5 708 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 MTHFD2LQ9H903 347 aaPredicted RBP14.31□□□□□ -0.12
COPS3-201ENST00000268717 FGF21Q9NSA1 209 aa14.31□□□□□ -0.12
COPS3-201ENST00000268717 PDP1Q9P0J1 537 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms