RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SETD6Q8TBK2 473 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 TANKQ92844 425 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 ZNF717Q9BY31 904 aaPredicted RBP14.58□□□□□ -0.08
TIMP3-201ENST00000266085 PCDH10Q9P2E7 1040 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 HCKP08631 526 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 VRK3Q8IV63 474 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 LSMEM2Q8N112 164 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 DENND6BQ8NEG7 585 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 THAP4Q8WY91 577 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 S100A16Q96FQ6 103 aaKnown RBP14.58□□□□□ -0.08
TIMP3-201ENST00000266085 CRB3Q9BUF7 120 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 HDAC8Q9BY41 377 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 IL21Q9HBE4 155 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 AASSQ9UDR5 926 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 VSTM2BA6NLU5 285 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 PRRT4C9JH25 899 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 LDB3O75112 727 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 OSMP13725 252 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 TACR1P25103 407 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 PBX2P40425 430 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 XCR1P46094 333 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 MTNR1AP48039 350 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 PER3P56645 1201 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 CDKN3Q16667 212 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 DIO2Q92813 273 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 TBC1D24Q9ULP9 559 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 PMF1-BGLAPU3KQ54 211 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 CSN2P05814 226 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 MMP2P08253 660 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 PRKCAP17252 672 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 ARNTP27540 789 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 OTX2P32243 289 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 GABARAPL2P60520 117 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 TRA2BP62995 288 aaKnown RBP14.57□□□□□ -0.08
TIMP3-201ENST00000266085 C6orf132Q5T0Z8 1188 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 CCDC80Q76M96 950 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 ZNF740Q8NDX6 193 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 FAM46AQ96IP4 442 aaKnown RBP14.57□□□□□ -0.08
TIMP3-201ENST00000266085 WDR83Q9BRX9 315 aaKnown RBP14.57□□□□□ -0.08
TIMP3-201ENST00000266085 DLGAP1O14490 977 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 BCAT2O15382 392 aaPredicted RBP14.57□□□□□ -0.08
TIMP3-201ENST00000266085 CLRN1P58418 232 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 SEC23BQ15437 767 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 SHISA6Q6ZSJ9 500 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 ANKRD60Q9BZ19 345 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 TTYH1Q9H313 450 aaPredicted RBP14.57□□□□□ -0.08
TIMP3-201ENST00000266085 POT1Q9NUX5 634 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 PAK1IP1Q9NWT1 392 aaPredicted RBP14.57□□□□□ -0.08
TIMP3-201ENST00000266085 NAALAD2Q9Y3Q0 740 aa14.57□□□□□ -0.08
TIMP3-201ENST00000266085 SH3D21A4FU49 640 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 ENTPD1P49961 510 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 MLF2Q15773 248 aaPredicted RBP14.56□□□□□ -0.08
TIMP3-201ENST00000266085 SWI5Q1ZZU3 235 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 C4orf46Q504U0 113 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 OR5D16Q8NGK9 328 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 CCDC107Q8WV48 283 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 CPNE2Q96FN4 548 aaPredicted RBP14.56□□□□□ -0.08
TIMP3-201ENST00000266085 SLC41A3Q96GZ6 507 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 OR1F2PQ96R84 312 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 GORASP2Q9H8Y8 452 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 KCMF1Q9P0J7 381 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 A0A1W2PPL8 197 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 NPIPA2E9PIF3 369 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 NPIPA3F8WFD2 350 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 H0YIV9 168 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 EGFP01133 1207 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 PGAM2P15259 253 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 NR0B1P51843 470 aaKnown RBP14.56□□□□□ -0.08
TIMP3-201ENST00000266085 MICAQ29983 383 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 C1orf94Q6P1W5 598 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 ZC3H14Q6PJT7 736 aaKnown RBP14.56□□□□□ -0.08
TIMP3-201ENST00000266085 OR4C15Q8NGM1 316 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 OR8K3Q8NH51 312 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 UTP4Q969X6 686 aaKnown RBP14.56□□□□□ -0.08
TIMP3-201ENST00000266085 MYEOVQ96EZ4 313 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 BMFQ96LC9 184 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 FANCFQ9NPI8 374 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 GGTA1PQ4G0N0 100 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 AKIRIN2Q53H80 203 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 HS3ST5Q8IZT8 346 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 OR9Q2Q8NGE9 314 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 OR8H1Q8NGG4 311 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 NMNAT1Q9HAN9 279 aaPredicted RBP14.56□□□□□ -0.08
TIMP3-201ENST00000266085 TAS2R10Q9NYW0 307 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 ZNF639Q9UID6 485 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 SIT1Q9Y3P8 196 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 CASC3O15234 703 aaKnown RBP14.56□□□□□ -0.08
TIMP3-201ENST00000266085 KDM4BO94953 1096 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 CCNOP22674 350 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 AHRP35869 848 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 EMP2P54851 167 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 SCRN3Q0VDG4 424 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 TRAM1Q15629 374 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 ZNF283Q8N7M2 679 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 MZB1Q8WU39 189 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 DMRTB1Q96MA1 342 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 WACQ9BTA9 647 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 B4GALT7Q9UBV7 327 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 BAIAP2Q9UQB8 552 aa14.56□□□□□ -0.08
TIMP3-201ENST00000266085 COL4A1P02462 1669 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms