RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ZNF28P17035 718 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 NSDHLQ15738 373 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 CCDC157Q569K6 752 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 CMPK2Q5EBM0 449 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 OR2T5Q6IEZ7 315 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 FRRS1Q6ZNA5 592 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 PIP4P1Q86T03 277 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 TMEM151BQ8IW70 566 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 CBR4Q8N4T8 237 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 COX18Q8N8Q8 333 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 OR7G1Q8NGA0 311 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 OR2T29Q8NH02 315 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 FBXL20Q96IG2 436 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 SDF2Q99470 211 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 OR10A5Q9H207 317 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 C8orf4Q9NR00 106 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 TOR4AQ9NXH8 423 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 NDUFAF4Q9P032 175 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 AKAP7Q9P0M2 348 aaPredicted RBP21.29■■□□□ 1
SMARCB1-201ENST00000263121 PCDHGA1Q9Y5H4 931 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 SEC16AO15027 2179 aa21.29■■□□□ 1
SMARCB1-201ENST00000263121 VSTM2BA6NLU5 285 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 MEN1O00255 615 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 GNGT2O14610 69 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 RASAL1O95294 804 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 AK1P00568 194 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 ACADSP16219 412 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 ZNF23P17027 643 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 OR1E2P47887 323 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 HPCAP84074 193 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 PSG6Q00889 435 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 PUM1Q14671 1186 aaKnown RBP eCLIP21.28■■□□□ 1
SMARCB1-201ENST00000263121 CYP27C1Q4G0S4 372 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 DCST2Q5T1A1 773 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 GPR151Q8TDV0 419 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 PIK3R3Q92569 461 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 PMEPA1Q969W9 287 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 SENP5Q96HI0 755 aaPredicted RBP21.28■■□□□ 1
SMARCB1-201ENST00000263121 LRFN5Q96NI6 719 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 STRADBQ9C0K7 418 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 ZNF350Q9GZX5 532 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 SLC26A1Q9H2B4 701 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 SLC39A1Q9NY26 324 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 VNN3Q9NY84 501 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 DTX4Q9Y2E6 619 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 TMX2-CTNND1H3BSU7 103 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 FCMRO60667 390 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 DIRAS1O95057 198 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 GABRA3P34903 492 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 IST1P53990 364 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 KCNC4Q03721 635 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 NRF1Q16656 503 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 TYW3Q6IPR3 259 aaKnown RBP21.28■■□□□ 1
SMARCB1-201ENST00000263121 LCN10Q6JVE6 187 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 C16orf52Q8NHV5 167 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 PROX1Q92786 737 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 FKBP10Q96AY3 582 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 ZNF354BQ96LW1 612 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 ZNF597Q96LX8 424 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 BTBD9Q96Q07 612 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 IFT80Q9P2H3 777 aaPredicted RBP21.28■■□□□ 1
SMARCB1-201ENST00000263121 SH3GLB1Q9Y371 365 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 LOXL2Q9Y4K0 774 aa21.28■■□□□ 1
SMARCB1-201ENST00000263121 A8MUA0 341 aa21.27■■□□□ 1
SMARCB1-201ENST00000263121 DDAH2O95865 285 aa21.27■■□□□ 1
SMARCB1-201ENST00000263121 ALBP02768 609 aa21.27■■□□□ 1
SMARCB1-201ENST00000263121 ATP6V1C1P21283 382 aa21.27■■□□□ 1
SMARCB1-201ENST00000263121 POU6F2P78424 691 aaPredicted RBP21.27■■□□□ 1
SMARCB1-201ENST00000263121 ZNHIT3Q15649 155 aaPredicted RBP21.27■■□□□ 1
SMARCB1-201ENST00000263121 ISXQ2M1V0 245 aa21.27■■□□□ 1
SMARCB1-201ENST00000263121 AP1ARQ63HQ0 302 aa21.27■■□□□ 1
SMARCB1-201ENST00000263121 SHISA6Q6ZSJ9 500 aa21.27■■□□□ 1
SMARCB1-201ENST00000263121 SVOPLQ8N434 492 aa21.27■■□□□ 1
SMARCB1-201ENST00000263121 ZNF300Q96RE9 604 aaPredicted RBP21.27■■□□□ 1
SMARCB1-201ENST00000263121 AMBRA1Q9C0C7 1298 aa21.27■■□□□ 1
SMARCB1-201ENST00000263121 SAP130Q9H0E3 1048 aa21.27■■□□□ 1
SMARCB1-201ENST00000263121 QRSL1Q9H0R6 528 aaKnown RBP21.27■■□□□ 1
SMARCB1-201ENST00000263121 IRF2BPLQ9H1B7 796 aa21.27■■□□□ 1
SMARCB1-201ENST00000263121 WDR45Q9Y484 360 aa21.27■■□□□ 1
SMARCB1-201ENST00000263121 CLCA3PQ9Y6N3 262 aa21.27■■□□□ 1
SMARCB1-201ENST00000263121 WDR87Q6ZQQ6 2873 aa21.27■■□□□ 1
SMARCB1-201ENST00000263121 GXYLT2A0PJZ3 443 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 DYRK3O43781 588 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 CNOT3O75175 753 aaKnown RBP21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 IGKV3-11P04433 115 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 ALPPP05187 535 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 PABPC4LP0CB38 370 aaKnown RBP21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 ITGA2P17301 1181 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 AGXTP21549 392 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 DCTP40126 519 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 SLC37A1P57057 533 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 FOXL2P58012 376 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 CCNJQ5T5M9 372 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 TBPL2Q6SJ96 375 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 TMEM179BQ7Z7N9 219 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 COMTD1Q86VU5 262 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 OR5K1Q8NHB7 308 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 OR14A16Q8NHC5 309 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 ZG16BQ96DA0 208 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 ZNF347Q96SE7 839 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms