RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 SOCS5O75159 536 aa13.58□□□□□ -0.23
CUX2-201ENST00000261726 ZNF43P17038 809 aa13.58□□□□□ -0.23
CUX2-201ENST00000261726 DNAJB1P25685 340 aa13.58□□□□□ -0.23
CUX2-201ENST00000261726 SIM1P81133 766 aaPredicted RBP13.58□□□□□ -0.23
CUX2-201ENST00000261726 ZXDBP98169 803 aa13.58□□□□□ -0.23
CUX2-201ENST00000261726 MEX3BQ6ZN04 569 aaKnown RBP13.58□□□□□ -0.23
CUX2-201ENST00000261726 IQCF1Q8N6M8 205 aa13.58□□□□□ -0.23
CUX2-201ENST00000261726 FCRL3Q96P31 734 aaPredicted RBP13.58□□□□□ -0.23
CUX2-201ENST00000261726 C19orf12Q9NSK7 152 aa13.58□□□□□ -0.23
CUX2-201ENST00000261726 SPDEFO95238 335 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 MT-CO2P00403 227 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 RPL35P42766 123 aaKnown RBP13.58□□□□□ -0.24
CUX2-201ENST00000261726 EIF2B1Q14232 305 aaKnown RBP13.58□□□□□ -0.24
CUX2-201ENST00000261726 C6orf141Q5SZD1 244 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 WDSUB1Q8N9V3 476 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 OR51L1Q8NGJ5 315 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 BRI3BPQ8WY22 251 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 TRAV18A0A075B6X5 111 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 F8W036 122 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 CLN5O75503 358 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 ENDOUP21128 410 aaKnown RBP13.58□□□□□ -0.24
CUX2-201ENST00000261726 NKX2-5P52952 324 aaPredicted RBP13.58□□□□□ -0.24
CUX2-201ENST00000261726 BLOC1S1P78537 153 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 CDK3Q00526 305 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 SQSTM1Q13501 440 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 ZNF791Q3KP31 576 aaPredicted RBP13.58□□□□□ -0.24
CUX2-201ENST00000261726 ENPP6Q6UWR7 440 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 CCDC71LQ8N9Z2 235 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 PRR11Q96HE9 360 aaPredicted RBP13.58□□□□□ -0.24
CUX2-201ENST00000261726 H0YAE9 185 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 H3BML4 177 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 MPC1LP0DKB6 136 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 FGF3P11487 239 aaPredicted RBP13.58□□□□□ -0.24
CUX2-201ENST00000261726 APLNRP35414 380 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 CD79BP40259 229 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 SOX9P48436 509 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 SSTP61278 116 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 RPS26P11Q5JNZ5 115 aaPredicted RBP13.58□□□□□ -0.24
CUX2-201ENST00000261726 TIFABQ6ZNK6 161 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.58□□□□□ -0.24
CUX2-201ENST00000261726 FKBP10Q96AY3 582 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 MVB12BQ9H7P6 319 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 LOC102723532A0A0G2JNH3 316 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 KLF11O14901 512 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 AGPAT2O15120 278 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 IL1RNP18510 177 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 PCGF3Q3KNV8 242 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 NXPE4Q6UWF7 544 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 LARP4Q71RC2 724 aaKnown RBP eCLIP13.58□□□□□ -0.24
CUX2-201ENST00000261726 MAMDC2Q7Z304 686 aaPredicted RBP13.58□□□□□ -0.24
CUX2-201ENST00000261726 SLC2A12Q8TD20 617 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 TPSD1Q9BZJ3 242 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 KCMF1Q9P0J7 381 aa13.58□□□□□ -0.24
CUX2-201ENST00000261726 F5H5K5 113 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 RRAS2P62070 204 aaPredicted RBP13.57□□□□□ -0.24
CUX2-201ENST00000261726 LPAL2Q16609 132 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 C2orf76Q3KRA6 126 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 SCML4Q8N228 414 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 PQLC3Q8N755 202 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 SAT2Q96F10 170 aaPredicted RBP13.57□□□□□ -0.24
CUX2-201ENST00000261726 MEIS3P1A6NDR6 274 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 PHYHO14832 338 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 SCAMP2O15127 329 aaKnown RBP13.57□□□□□ -0.24
CUX2-201ENST00000261726 TNFRSF1BP20333 461 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 BDKRB2P30411 391 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 RAB31Q13636 194 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 PON2Q15165 354 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 KIAA0319Q5VV43 1072 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 CYP4V2Q6ZWL3 525 aaPredicted RBP13.57□□□□□ -0.24
CUX2-201ENST00000261726 ACBD7Q8N6N7 88 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 BBS1Q8NFJ9 593 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 HUS1BQ8NHY5 278 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 NUDT21O43809 227 aaKnown RBP13.57□□□□□ -0.24
CUX2-201ENST00000261726 C18orf21Q32NC0 220 aaPredicted RBP13.57□□□□□ -0.24
CUX2-201ENST00000261726 ZNF420Q8TAQ5 688 aaPredicted RBP13.57□□□□□ -0.24
CUX2-201ENST00000261726 OR5B2Q96R09 309 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 MEPEQ9NQ76 525 aaPredicted RBP13.57□□□□□ -0.24
CUX2-201ENST00000261726 KLHL13Q9P2N7 655 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 DNAJB11Q9UBS4 358 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 RHBDD3Q9Y3P4 386 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 SLC16A5O15375 505 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 FBXO45P0C2W1 286 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 ETFAP13804 333 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 NPRL3Q12980 569 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 OR52E8Q6IFG1 317 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 C3P1Q6ZMU1 363 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 PRR22Q8IZ63 422 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 TSPEARQ8WU66 669 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 LGALS12Q96DT0 336 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 SLC41A3Q96GZ6 507 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 TSPAN33Q86UF1 283 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 TEX26Q8N6G2 289 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 FAM83FQ8NEG4 500 aaPredicted RBP13.57□□□□□ -0.24
CUX2-201ENST00000261726 C16orf78Q8WTQ4 265 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 MAL2Q969L2 176 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 SPTSSAQ969W0 71 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 MAP3K3Q99759 626 aa13.57□□□□□ -0.24
CUX2-201ENST00000261726 GMDSO60547 372 aa13.56□□□□□ -0.24
CUX2-201ENST00000261726 NKX3-2P78367 333 aa13.56□□□□□ -0.24
CUX2-201ENST00000261726 DOC2AQ14183 400 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms