RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 PRDM6Q9NQX0 595 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 SIRT3Q9NTG7 399 aaPredicted RBP13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 KCNE3Q9Y6H6 103 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 FAM170BA6NMN3 283 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 NOTOA8MTQ0 251 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 PRRT4C9JH25 899 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 TBX6O95947 436 aaPredicted RBP13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 SOD1P00441 154 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 KELP23276 732 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 BSGP35613 385 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 SMSP52788 366 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 TATDN3Q17R31 274 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 Q5BKY6 102 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 RNASE12Q5GAN4 147 aaKnown RBP13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 XKRXQ6PP77 449 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 VWA5B2Q8N398 1253 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 DCLRE1CQ96SD1 692 aaKnown RBP13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 IMP3Q9NV31 184 aaKnown RBP13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 LOC102723532A0A0G2JNH3 316 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 PLOD3O60568 738 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 HMGN2P05204 90 aaKnown RBP13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 YES1P07947 543 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 IFI30P13284 250 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 SDHBP21912 280 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 LTBRP36941 435 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 IL12RB1P42701 662 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 GPR4P46093 362 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 LCN1P1Q5VSP4 162 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 SMARCD3Q6STE5 483 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 VITQ6UXI7 678 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 NUDT13Q86X67 352 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 GHDCQ8N2G8 530 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 YIPF7Q8N8F6 280 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 ANKK1Q8NFD2 765 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 OR8K5Q8NH50 307 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 A4GALTQ9NPC4 353 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 CSNK1G3Q9Y6M4 447 aa13.62□□□□□ -0.23
SFSWAP-201ENST00000261674 TRPM6Q9BX84 2022 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 CARNS1A5YM72 827 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 POLR1CO15160 346 aaPredicted RBP13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 PGRMC2O15173 223 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 PLA2G10O15496 165 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 ATXN8OSP0DMR3 200 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 ADH5P11766 374 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 CCR8P51685 355 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 CTBP2P56545 445 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 KLHL22Q53GT1 634 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 SLC27A4Q6P1M0 643 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 TMEM107Q6UX40 140 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 FAM92BQ6ZTR7 304 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 FAM129CQ86XR2 697 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 TBC1D19Q8N5T2 526 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 ZNF557Q8N988 423 aaPredicted RBP13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 APOBEC4Q8WW27 367 aaKnown RBP13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 JPH3Q8WXH2 748 aaPredicted RBP13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 RGMAQ96B86 450 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 MS4A8Q9BY19 250 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 MTCH2Q9Y6C9 303 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 SPTBP11277 2137 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 DOCK9Q9BZ29 2069 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 A0A087WUU8 490 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 ISM1B1AKI9 464 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 NDUFS4O43181 175 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 PCDH8O95206 1070 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 LALBAP00709 142 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 IL1AP01583 271 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 DDOSTP39656 456 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 CDH11P55287 796 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 IKBIPQ70UQ0 350 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 PRICKLE2Q7Z3G6 844 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 VRK2Q86Y07 508 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 LRRC56Q8IYG6 542 aaPredicted RBP13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 DACT3Q96B18 629 aaPredicted RBP13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 ARRDC3Q96B67 414 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 FERD3LQ96RJ6 166 aa13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 H2AFY2Q9P0M6 372 aaPredicted RBP13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 DIMT1Q9UNQ2 313 aaKnown RBP13.61□□□□□ -0.23
SFSWAP-201ENST00000261674 DVL2O14641 736 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 ERI3O43414 337 aaKnown RBP13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 CHRM4P08173 479 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 HOXB3P14651 431 aaPredicted RBP13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 GNSP15586 552 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 MAPK9P45984 424 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 CSTF1Q05048 431 aaKnown RBP13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 WSCD2Q2TBF2 565 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 TOR1AIP1Q5JTV8 583 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 SLC35F1Q5T1Q4 408 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 PIP5KL1Q5T9C9 394 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 FAM46CQ5VWP2 391 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 FAM26EQ8N5C1 309 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 NEIL3Q8TAT5 605 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 LGR4Q9BXB1 951 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 POLDIP3Q9BY77 421 aaKnown RBP13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 IRF2BPLQ9H1B7 796 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 KLHL31Q9H511 634 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 TRIM45Q9H8W5 580 aaPredicted RBP13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 FZD3Q9NPG1 666 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 DPP7Q9UHL4 492 aa13.6□□□□□ -0.23
SFSWAP-201ENST00000261674 A0A0B4J293 547 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms