RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ARL5BQ96KC2 179 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 TCEANC2Q96MN5 208 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 GPR137Q96N19 417 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 CATSPER2Q96P56 530 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 BCL7BQ9BQE9 202 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 ZSCAN5AQ9BUG6 496 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 CCDC28BQ9BUN5 200 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 RAB33BQ9H082 229 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 CXXC4Q9H2H0 198 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 PANK3Q9H999 370 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 WDR41Q9HAD4 459 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 KCNK13Q9HB14 408 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 PLEKHA3Q9HB20 300 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 UBE2TQ9NPD8 197 aaPredicted RBP3.6□□□□□ -1.83
CCDC54-201ENST00000261058 ZCCHC3Q9NUD5 404 aaKnown RBP3.6□□□□□ -1.83
CCDC54-201ENST00000261058 DDX28Q9NUL7 540 aaKnown RBP3.6□□□□□ -1.83
CCDC54-201ENST00000261058 SMPD3Q9NY59 655 aaPredicted RBP3.6□□□□□ -1.83
CCDC54-201ENST00000261058 PAK5Q9P286 719 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 ATPIF1Q9UII2 106 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 SPATA2Q9UM82 520 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 CLEC4AQ9UMR7 237 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 ATP6V1DQ9Y5K8 247 aa3.6□□□□□ -1.83
CCDC54-201ENST00000261058 NCAPD2Q15021 1401 aa3.59□□□□□ -1.83
CCDC54-201ENST00000261058 C15orf38-AP3S2A0A0A6YYH1 394 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 A0A1B0GUL7 405 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 SH3PXD2BA1X283 911 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 BCLAF3A2AJT9 711 aaKnown RBP3.59□□□□□ -1.84
CCDC54-201ENST00000261058 GOLGA6L4A6NEF3 574 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 TLR4O00206 839 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 FBP2O00757 339 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 OGTO15294 1046 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 ZNF749O43361 778 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 RHBDL1O75783 438 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 PCCBP05166 539 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 FGF4P08620 206 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 EPB41P11171 864 aaKnown RBP3.59□□□□□ -1.84
CCDC54-201ENST00000261058 KCNK10P57789 538 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 RPL27P61353 136 aaKnown RBP3.59□□□□□ -1.84
CCDC54-201ENST00000261058 ITPK1Q13572 414 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 DOC2AQ14183 400 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 ARHGAP19Q14CB8 494 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 WDR43Q15061 677 aaKnown RBP eCLIP3.59□□□□□ -1.84
CCDC54-201ENST00000261058 ZNF573Q86YE8 665 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 PSTKQ8IV42 348 aaKnown RBP3.59□□□□□ -1.84
CCDC54-201ENST00000261058 ZNF485Q8NCK3 441 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 OR2T34Q8NGX1 318 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 ZNF671Q8TAW3 534 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 TAF15Q92804 592 aaKnown RBP eCLIP3.59□□□□□ -1.84
CCDC54-201ENST00000261058 PNPLA2Q96AD5 504 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 CCDC51Q96ER9 411 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 CAPNS2Q96L46 248 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 ATP6V1G3Q96LB4 118 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 TAAR6Q96RI8 345 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 ATOH8Q96SQ7 321 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 SPAG8Q99932 426 aaPredicted RBP3.59□□□□□ -1.84
CCDC54-201ENST00000261058 MTG1Q9BT17 334 aaPredicted RBP3.59□□□□□ -1.84
CCDC54-201ENST00000261058 RAB17Q9H0T7 212 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 CARD9Q9H257 536 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 MOB1AQ9H8S9 216 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 GNB4Q9HAV0 340 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 RPRD1BQ9NQG5 326 aaKnown RBP3.59□□□□□ -1.84
CCDC54-201ENST00000261058 DEPPQ9NTK1 212 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 FKBP14Q9NWM8 211 aa3.59□□□□□ -1.84
CCDC54-201ENST00000261058 NIP7Q9Y221 180 aaKnown RBP eCLIP3.59□□□□□ -1.84
CCDC54-201ENST00000261058 GOLGA6L10A6NI86 522 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 ACOD1A6NK06 481 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 A8MXK9 166 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 RSPH10B2B2RC85 870 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 NVLO15381 856 aaKnown RBP3.58□□□□□ -1.84
CCDC54-201ENST00000261058 SULT1B1O43704 296 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 CYTH3O43739 400 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 KIAA0513O60268 411 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 CSO75390 466 aaKnown RBP3.58□□□□□ -1.84
CCDC54-201ENST00000261058 MTX2O75431 263 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 CTAG2O75638 210 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 ZNF189O75820 626 aaPredicted RBP3.58□□□□□ -1.84
CCDC54-201ENST00000261058 OR6A2O95222 327 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 CXCL10P02778 98 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 LYNP07948 512 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 SFTPBP07988 381 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 RSPH10BP0C881 870 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 ADORA3P0DMS8 318 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 RALAP11233 206 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 TAGLN2P37802 199 aaKnown RBP3.58□□□□□ -1.84
CCDC54-201ENST00000261058 ALDH3B1P43353 468 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 TNFRSF4P43489 277 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 CNN1P51911 297 aaKnown RBP3.58□□□□□ -1.84
CCDC54-201ENST00000261058 NDUFV3P56181 108 aaKnown RBP3.58□□□□□ -1.84
CCDC54-201ENST00000261058 RPS27AP62979 156 aaKnown RBP3.58□□□□□ -1.84
CCDC54-201ENST00000261058 MRPS15P82914 257 aaKnown RBP3.58□□□□□ -1.84
CCDC54-201ENST00000261058 PLD1Q13393 1074 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 FASTKQ14296 549 aaKnown RBP3.58□□□□□ -1.84
CCDC54-201ENST00000261058 SLC17A1Q14916 467 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 KARSQ15046 597 aaKnown RBP3.58□□□□□ -1.84
CCDC54-201ENST00000261058 ZMYND11Q15326 602 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 SIX1Q15475 284 aaPredicted RBP3.58□□□□□ -1.84
CCDC54-201ENST00000261058 CCL14Q16627 93 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 NADK2Q4G0N4 442 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 KCTD21Q4G0X4 260 aa3.58□□□□□ -1.84
CCDC54-201ENST00000261058 MPPE1Q53F39 396 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms