RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 GPR87Q9BY21 358 aa3.83□□□□□ -1.8
RNF38-201ENST00000259605 WDR12Q9GZL7 423 aaKnown RBP3.83□□□□□ -1.8
RNF38-201ENST00000259605 POLR2J3Q9H1A7 115 aaKnown RBP3.83□□□□□ -1.8
RNF38-201ENST00000259605 RLIMQ9NVW2 624 aa3.83□□□□□ -1.8
RNF38-201ENST00000259605 TAS2R10Q9NYW0 307 aa3.83□□□□□ -1.8
RNF38-201ENST00000259605 CSNK1G3Q9Y6M4 447 aa3.83□□□□□ -1.8
RNF38-201ENST00000259605 QRICH2Q9H0J4 1663 aa3.83□□□□□ -1.8
RNF38-201ENST00000259605 hCG_1818297A0A087WSY0 165 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 METTL12A8MUP2 240 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 GABARAPH6UMI1 98 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SHOXO15266 292 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 GALR2O43603 387 aaPredicted RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 SCO1O75880 301 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 GABARAPO95166 117 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 IGHG1P01857 330 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ZNF728P0DKX0 622 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 IL1RNP18510 177 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 UGT2B10P36537 528 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 RBMXP38159 391 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 CEACAM3P40198 252 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 FABP6P51161 128 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SUB1P53999 127 aaKnown RBP eCLIP3.82□□□□□ -1.8
RNF38-201ENST00000259605 CORO7P57737 925 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 MCCD1P59942 119 aaPredicted RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 INCA1Q0VD86 236 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SEMA5AQ13591 1074 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 IL11RAQ14626 422 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ATP6AP1Q15904 470 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 RSPO4Q2I0M5 234 aaPredicted RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 HBMQ6B0K9 141 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 RTL6Q6ICC9 239 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ARSKQ6UWY0 536 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 TMEM184AQ6ZMB5 413 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ZNF836Q6ZNA1 936 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ZNF627Q7L945 461 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ANKRD13BQ86YJ7 626 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SCUBE1Q8IWY4 988 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 KLHL36Q8N4N3 616 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 MREGQ8N565 214 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 C1orf52Q8N6N3 182 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 CCDC71LQ8N9Z2 235 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 OR4K15Q8NH41 348 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 FAM110BQ8TC76 370 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SEMA4DQ92854 862 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 INTS12Q96CB8 462 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 NMD3Q96D46 503 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 PWWP2AQ96N64 755 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SLC35A5Q9BS91 424 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ZBTB26Q9HCK0 441 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 DNMT3BQ9UBC3 853 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 DKK3Q9UBP4 350 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 MALT1Q9UDY8 824 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 FOXD3Q9UJU5 478 aaPredicted RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 SARDHQ9UL12 918 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SCAF4O95104 1147 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 EGFP01133 1207 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 IFNA1P01562 189 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 H1F0P07305 194 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 EBLN1P0CF75 366 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 IFI30P13284 250 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 GABRR1P24046 479 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 EDNRAP25101 427 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 PSMA1P25786 263 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 ARNTP27540 789 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ADH6P28332 368 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 PRKCIP41743 596 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 GRIA3P42263 894 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 THBS3P49746 956 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 CLDN2P57739 230 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ID2Q02363 134 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 C17orf67Q0P5P2 114 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 POU4F2Q12837 409 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ADAM15Q13444 863 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 IRF4Q15306 451 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 HFEQ30201 348 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 LRIT3Q3SXY7 679 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 TIGD2Q4W5G0 525 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SFT2D3Q587I9 215 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 COL13A1Q5TAT6 717 aaPredicted RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 CDCA2Q69YH5 1023 aaPredicted RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 FAM109BQ6ICB4 259 aaPredicted RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 PNCKQ6P2M8 343 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 C17orf107Q6ZR85 190 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 NYAP1Q6ZVC0 841 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 LRRC17Q8N6Y2 441 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 NUP43Q8NFH3 380 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 OR7A2PQ8NGA2 310 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 OR11G2Q8NGC1 345 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 OR6N2Q8NGY6 317 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 COQ8AQ8NI60 647 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 OSTF1Q92882 214 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 SLC30A3Q99726 388 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 CMSS1Q9BQ75 279 aaKnown RBP3.82□□□□□ -1.8
RNF38-201ENST00000259605 MND1Q9BWT6 205 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 HDAC8Q9BY41 377 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 GNB4Q9HAV0 340 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 CHST7Q9NS84 486 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 GNG12Q9UBI6 72 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 ZCWPW2A0A1B0GU75 182 aa3.82□□□□□ -1.8
RNF38-201ENST00000259605 LINC00854A0A1B0GVQ3 168 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms