RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 F11P03951 625 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 HIST1H2AGP0C0S8 130 aaPredicted RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 CYP4B1P13584 511 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 PPP3CBP16298 524 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 HIST1H2ADP20671 130 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 SERPINA2P20848 420 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 AGAP20933 346 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 S1PR1P21453 382 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 C21orf33P30042 268 aaPredicted RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 PTTG1IPP53801 180 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 RGS8P57771 180 aaPredicted RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 ADARB1P78563 741 aaKnown RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 SHC2P98077 582 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 PIGFQ07326 219 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 PPIGQ13427 754 aaKnown RBP eCLIP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 DUOXA1Q1HG43 343 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 CBWD6Q4V339 395 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 UBXN11Q5T124 520 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 HIST2H2AA3Q6FI13 130 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 DEFB132Q7Z7B7 95 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 NXPE1Q8N323 547 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 GUF1Q8N442 669 aaKnown RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 NUBPLQ8TB37 319 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 CSGALNACT1Q8TDX6 532 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 ERGIC1Q969X5 290 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 CREB3L1Q96BA8 519 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 ULK4Q96C45 1275 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 ASB9Q96DX5 294 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 HIST1H2AHQ96KK5 128 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 ACOX2Q99424 681 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 HIST1H2AJQ99878 128 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 MAGEB5Q9BZ81 275 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 ZDHHC5Q9C0B5 715 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 HAPLN2Q9GZV7 340 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 TMEM117Q9H0C3 514 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 TMEM38AQ9H6F2 299 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 NMNAT1Q9HAN9 279 aaPredicted RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 ZBTB20Q9HC78 741 aaPredicted RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 ACP6Q9NPH0 428 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 BTG4Q9NY30 223 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 GTSE1Q9NYZ3 720 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 GABRQQ9UN88 632 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 PDE10AQ9Y233 779 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 PCDHA11Q9Y5I1 949 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 RGPD3A6NKT7 1758 aaPredicted RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 RGPD4Q7Z3J3 1758 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 ECM29Q5VYK3 1845 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 A0A096LPI6 279 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 NKX6-3A6NJ46 265 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 KCNU1A8MYU2 1149 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 SRPX2O60687 465 aaPredicted RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 PIAS1O75925 651 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 HMBSP08397 361 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 SPARCP09486 303 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 ZNF14P17017 642 aaPredicted RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 CNR1P21554 472 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 THPOP40225 353 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 CHRNA4P43681 627 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 MC1RQ01726 317 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 COL9A2Q14055 689 aaPredicted RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 BTNL3Q6UXE8 466 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 CASP12Q6UXS9 341 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 SYT9Q86SS6 491 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 VRK3Q8IV63 474 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 KATNAL2Q8IYT4 538 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 OR52N4Q8NGI2 321 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 OR4A15Q8NGL6 344 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 FIBINQ8TAL6 211 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 CALML4Q96GE6 196 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 C3orf30Q96M34 536 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 MUS81Q96NY9 551 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 PTPN18Q99952 460 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 THUMPD3Q9BV44 507 aaKnown RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 RAB33BQ9H082 229 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 SAP130Q9H0E3 1048 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 SOX17Q9H6I2 414 aaPredicted RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 KIR3DX1Q9H7L2 352 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 GALNT9Q9HCQ5 603 aa7.32□□□□□ -1.24
GPNMB-201ENST00000258733 GAR1Q9NY12 217 aaKnown RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 RCC2Q9P258 522 aaKnown RBP7.32□□□□□ -1.24
GPNMB-201ENST00000258733 A0A0G2JLW4 131 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 SMIM30A4D0T7 59 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 TBC1D3BA6NDS4 549 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 MYO1GB0I1T2 1018 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 RGS14O43566 566 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 FKTNO75072 461 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 B3GAT3O94766 335 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 PRAMEF1O95521 474 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 C8GP07360 202 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 G6PDP11413 515 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 C4BPBP20851 252 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 CCNOP22674 350 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 CSNK1EP49674 416 aaKnown RBP7.31□□□□□ -1.24
GPNMB-201ENST00000258733 ERVS71-1P61550 626 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 MRPS10P82664 201 aaKnown RBP7.31□□□□□ -1.24
GPNMB-201ENST00000258733 FKBP3Q00688 224 aaKnown RBP7.31□□□□□ -1.24
GPNMB-201ENST00000258733 EMX1Q04741 257 aaPredicted RBP7.31□□□□□ -1.24
GPNMB-201ENST00000258733 PEA15Q15121 130 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 TBC1D3GQ6DHY5 549 aa7.31□□□□□ -1.24
GPNMB-201ENST00000258733 GDF6Q6KF10 455 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms