RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 ISXQ2M1V0 245 aa8.8□□□□□ -1
NIP7-202ENST00000254941 IFI44LQ53G44 452 aa8.8□□□□□ -1
NIP7-202ENST00000254941 CCDC157Q569K6 752 aa8.8□□□□□ -1
NIP7-202ENST00000254941 SFT2D3Q587I9 215 aa8.8□□□□□ -1
NIP7-202ENST00000254941 STPG1Q5TH74 334 aa8.8□□□□□ -1
NIP7-202ENST00000254941 AP1ARQ63HQ0 302 aa8.8□□□□□ -1
NIP7-202ENST00000254941 EPHX4Q8IUS5 362 aa8.8□□□□□ -1
NIP7-202ENST00000254941 TMEM151BQ8IW70 566 aa8.8□□□□□ -1
NIP7-202ENST00000254941 ZNF615Q8N8J6 731 aa8.8□□□□□ -1
NIP7-202ENST00000254941 ICA1LQ8NDH6 482 aa8.8□□□□□ -1
NIP7-202ENST00000254941 OR7G1Q8NGA0 311 aa8.8□□□□□ -1
NIP7-202ENST00000254941 APOBEC4Q8WW27 367 aaKnown RBP8.8□□□□□ -1
NIP7-202ENST00000254941 GEMIN6Q8WXD5 167 aaKnown RBP8.8□□□□□ -1
NIP7-202ENST00000254941 DNAJC9Q8WXX5 260 aa8.8□□□□□ -1
NIP7-202ENST00000254941 FKBP10Q96AY3 582 aa8.8□□□□□ -1
NIP7-202ENST00000254941 SENP5Q96HI0 755 aaPredicted RBP8.8□□□□□ -1
NIP7-202ENST00000254941 VSTM2LQ96N03 204 aa8.8□□□□□ -1
NIP7-202ENST00000254941 COL21A1Q96P44 957 aa8.8□□□□□ -1
NIP7-202ENST00000254941 SDF2Q99470 211 aa8.8□□□□□ -1
NIP7-202ENST00000254941 LMF2Q9BU23 707 aaKnown RBP8.8□□□□□ -1
NIP7-202ENST00000254941 CNPPD1Q9BV87 410 aa8.8□□□□□ -1
NIP7-202ENST00000254941 SPATA5L1Q9BVQ7 753 aa8.8□□□□□ -1
NIP7-202ENST00000254941 PNO1Q9NRX1 252 aaKnown RBP8.8□□□□□ -1
NIP7-202ENST00000254941 SLC39A1Q9NY26 324 aa8.8□□□□□ -1
NIP7-202ENST00000254941 IFT80Q9P2H3 777 aaPredicted RBP8.8□□□□□ -1
NIP7-202ENST00000254941 SEC14L3Q9UDX4 400 aa8.8□□□□□ -1
NIP7-202ENST00000254941 BAG5Q9UL15 447 aa8.8□□□□□ -1
NIP7-202ENST00000254941 OAZ3Q9UMX2 235 aa8.8□□□□□ -1
NIP7-202ENST00000254941 ERVK-19Q9WJR5 959 aa8.8□□□□□ -1
NIP7-202ENST00000254941 C15orf41Q9Y2V0 281 aa8.8□□□□□ -1
NIP7-202ENST00000254941 DTNAQ9Y4J8 743 aa8.8□□□□□ -1
NIP7-202ENST00000254941 CLCA3PQ9Y6N3 262 aa8.8□□□□□ -1
NIP7-202ENST00000254941 SDK2Q58EX2 2172 aa8.79□□□□□ -1
NIP7-202ENST00000254941 hCG_2039718K7EN88 272 aa8.79□□□□□ -1
NIP7-202ENST00000254941 ACOX3O15254 700 aa8.79□□□□□ -1
NIP7-202ENST00000254941 DYRK3O43781 588 aa8.79□□□□□ -1
NIP7-202ENST00000254941 DPM1O60762 260 aa8.79□□□□□ -1
NIP7-202ENST00000254941 ZIC2O95409 532 aaPredicted RBP8.79□□□□□ -1
NIP7-202ENST00000254941 AK1P00568 194 aa8.79□□□□□ -1
NIP7-202ENST00000254941 CLPSP04118 112 aa8.79□□□□□ -1
NIP7-202ENST00000254941 IGKV3-11P04433 115 aa8.79□□□□□ -1
NIP7-202ENST00000254941 FESP07332 822 aa8.79□□□□□ -1
NIP7-202ENST00000254941 AGXTP21549 392 aa8.79□□□□□ -1
NIP7-202ENST00000254941 KCNJ5P48544 419 aa8.79□□□□□ -1
NIP7-202ENST00000254941 RAB15P59190 212 aa8.79□□□□□ -1
NIP7-202ENST00000254941 CHRNEQ04844 493 aa8.79□□□□□ -1
NIP7-202ENST00000254941 TRIP6Q15654 476 aaKnown RBP8.79□□□□□ -1
NIP7-202ENST00000254941 OR2T5Q6IEZ7 315 aa8.79□□□□□ -1
NIP7-202ENST00000254941 PPP4R4Q6NUP7 873 aa8.79□□□□□ -1
NIP7-202ENST00000254941 ZNF517Q6ZMY9 492 aaPredicted RBP8.79□□□□□ -1
NIP7-202ENST00000254941 ZBTB49Q6ZSB9 765 aa8.79□□□□□ -1
NIP7-202ENST00000254941 OLIG3Q7RTU3 272 aa8.79□□□□□ -1
NIP7-202ENST00000254941 PRSS58Q8IYP2 241 aa8.79□□□□□ -1
NIP7-202ENST00000254941 COX18Q8N8Q8 333 aa8.79□□□□□ -1
NIP7-202ENST00000254941 GPR32P1Q8NGA4 272 aa8.79□□□□□ -1
NIP7-202ENST00000254941 OR2T29Q8NH02 315 aa8.79□□□□□ -1
NIP7-202ENST00000254941 C16orf52Q8NHV5 167 aa8.79□□□□□ -1
NIP7-202ENST00000254941 SPPL2AQ8TCT8 520 aa8.79□□□□□ -1
NIP7-202ENST00000254941 GPR151Q8TDV0 419 aa8.79□□□□□ -1
NIP7-202ENST00000254941 PMEPA1Q969W9 287 aa8.79□□□□□ -1
NIP7-202ENST00000254941 LIN37Q96GY3 246 aaPredicted RBP8.79□□□□□ -1
NIP7-202ENST00000254941 VPS50Q96JG6 964 aa8.79□□□□□ -1
NIP7-202ENST00000254941 C9orf16Q9BUW7 83 aa8.79□□□□□ -1
NIP7-202ENST00000254941 ULBP3Q9BZM4 244 aa8.79□□□□□ -1
NIP7-202ENST00000254941 ZNF350Q9GZX5 532 aa8.79□□□□□ -1
NIP7-202ENST00000254941 OR10A5Q9H207 317 aa8.79□□□□□ -1
NIP7-202ENST00000254941 VCXQ9H320 206 aa8.79□□□□□ -1
NIP7-202ENST00000254941 COQ10BQ9H8M1 238 aa8.79□□□□□ -1
NIP7-202ENST00000254941 MTHFD2LQ9H903 347 aaPredicted RBP8.79□□□□□ -1
NIP7-202ENST00000254941 FOLH1BQ9HBA9 442 aa8.79□□□□□ -1
NIP7-202ENST00000254941 C8orf4Q9NR00 106 aa8.79□□□□□ -1
NIP7-202ENST00000254941 THSD1Q9NS62 852 aa8.79□□□□□ -1
NIP7-202ENST00000254941 NDUFAF4Q9P032 175 aa8.79□□□□□ -1
NIP7-202ENST00000254941 ABCG2Q9UNQ0 655 aa8.79□□□□□ -1
NIP7-202ENST00000254941 SH3GLB1Q9Y371 365 aa8.79□□□□□ -1
NIP7-202ENST00000254941 AHCTF1Q8WYP5 2266 aa8.79□□□□□ -1
NIP7-202ENST00000254941 GVINP1Q7Z2Y8 2422 aa8.79□□□□□ -1
NIP7-202ENST00000254941 FREM2Q5SZK8 3169 aa8.79□□□□□ -1
NIP7-202ENST00000254941 PRAMEF25A6NGN4 478 aa8.79□□□□□ -1
NIP7-202ENST00000254941 SAC3D1A6NKF1 404 aa8.79□□□□□ -1
NIP7-202ENST00000254941 TTC36A6NLP5 189 aa8.79□□□□□ -1
NIP7-202ENST00000254941 IDSB3KWA1 339 aa8.79□□□□□ -1
NIP7-202ENST00000254941 H0YJX3 145 aa8.79□□□□□ -1
NIP7-202ENST00000254941 FCMRO60667 390 aa8.79□□□□□ -1
NIP7-202ENST00000254941 STX11O75558 287 aa8.79□□□□□ -1
NIP7-202ENST00000254941 DDAH2O95865 285 aa8.79□□□□□ -1
NIP7-202ENST00000254941 KLK3P07288 261 aaPredicted RBP8.79□□□□□ -1
NIP7-202ENST00000254941 CYC1P08574 325 aa8.79□□□□□ -1
NIP7-202ENST00000254941 CDK4P11802 303 aa8.79□□□□□ -1
NIP7-202ENST00000254941 ITIH1P19827 911 aa8.79□□□□□ -1
NIP7-202ENST00000254941 TNFRSF1BP20333 461 aa8.79□□□□□ -1
NIP7-202ENST00000254941 GABRA3P34903 492 aa8.79□□□□□ -1
NIP7-202ENST00000254941 OR1E2P47887 323 aa8.79□□□□□ -1
NIP7-202ENST00000254941 AQP4P55087 323 aa8.79□□□□□ -1
NIP7-202ENST00000254941 SLC37A1P57057 533 aa8.79□□□□□ -1
NIP7-202ENST00000254941 HPCAP84074 193 aa8.79□□□□□ -1
NIP7-202ENST00000254941 KCNC4Q03721 635 aa8.79□□□□□ -1
NIP7-202ENST00000254941 ZNF155Q12901 538 aaPredicted RBP8.79□□□□□ -1
NIP7-202ENST00000254941 PUM1Q14671 1186 aaKnown RBP eCLIP8.79□□□□□ -1
NIP7-202ENST00000254941 ZNHIT3Q15649 155 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms