RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 CCDC116Q8IYX3 515 aa16.06■□□□□ 0.16
SLC52A1-201ENST00000254853 OR4F15Q8NGB8 312 aa16.06■□□□□ 0.16
SLC52A1-201ENST00000254853 SLC38A2Q96QD8 506 aa16.06■□□□□ 0.16
SLC52A1-201ENST00000254853 SEMA4GQ9NTN9 838 aa16.06■□□□□ 0.16
SLC52A1-201ENST00000254853 CLCA2Q9UQC9 943 aa16.06■□□□□ 0.16
SLC52A1-201ENST00000254853 A0A0G2JPF8 293 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 TRDV1A0A1B0GX56 115 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 A0A1W2PS29 197 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 CPSF4LA6NMK7 179 aaKnown RBP16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 HNRNPCL2B2RXH8 293 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 HNRNPCL3B7ZW38 293 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 C4orf51C9J302 202 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 CASC3O15234 703 aaKnown RBP16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 CH25HO95992 272 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 HNRNPCL4P0DMR1 293 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 SLC2A2P11168 524 aaPredicted RBP16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 SLC1A3P43003 542 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 TSPAN31Q12999 210 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 PAMR1Q6UXH9 720 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 ZNF784Q8NCA9 323 aaPredicted RBP16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 ZNF296Q8WUU4 475 aaPredicted RBP16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 ZG16BQ96DA0 208 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 SOSTQ9BQB4 213 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 TMED9Q9BVK6 235 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 FAIM2Q9BWQ8 316 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 PITHD1Q9GZP4 211 aaPredicted RBP16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 RNF208Q9H0X6 261 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 XKR8Q9H6D3 395 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 PPP1R3EQ9H7J1 279 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 SLC27A6Q9Y2P4 619 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 IRAK3Q9Y616 596 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 CLEC3AO75596 197 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 C8orf89P0DMQ9 161 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 MAP2K3P46734 347 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 CDH11P55287 796 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 COL9A2Q14055 689 aaPredicted RBP16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 ELAVL3Q14576 367 aaKnown RBP16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 INSL4Q14641 139 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 ZNF311Q5JNZ3 666 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 TRIQKQ629K1 86 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 TMEM107Q6UX40 140 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 ADAMTSL4Q6UY14 1074 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 VRK2Q86Y07 508 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 Q8N402 240 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 NLGN4YQ8NFZ3 816 aaPredicted RBP16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 CNRIP1Q96F85 164 aaPredicted RBP16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 ZFYVE19Q96K21 471 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 ATF6BQ99941 703 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 HDHD5Q9BXW7 423 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 TBC1D17Q9HA65 648 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 ZDHHC4Q9NPG8 344 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 B3GAT2Q9NPZ5 323 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 MAU2Q9Y6X3 613 aa16.05■□□□□ 0.16
SLC52A1-201ENST00000254853 A0A1W2PR48 441 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 SHISA3A0PJX4 238 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 GNSP15586 552 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 MNX1P50219 401 aaPredicted RBP16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 CDK3Q00526 305 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 SNAP47Q5SQN1 464 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 SLC30A6Q6NXT4 461 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 TMEM64Q6YI46 380 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 RASSF6Q6ZTQ3 369 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 C19orf18Q8NEA5 215 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 OR4Q3Q8NH05 313 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 OR8K5Q8NH50 307 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 RSPRY1Q96DX4 576 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 PRRG3Q9BZD7 231 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 ATG4BQ9Y4P1 393 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 HCN1O60741 890 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 SLC35G4P0C7Q5 338 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 ACP5P13686 325 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 HOXB3P14651 431 aaPredicted RBP16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 HLA-DMAP28067 261 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 TRHRP34981 398 aaPredicted RBP16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 IFNGR2P38484 337 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 OMPP47874 163 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 CHRNEQ04844 493 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 ZNF155Q12901 538 aaPredicted RBP16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 GNA13Q14344 377 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 SLC9A5Q14940 896 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 TRAM2Q15035 370 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 YIF1BQ5BJH7 314 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 PLET1Q6UQ28 207 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 LSRQ86X29 649 aaPredicted RBP16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 MARCH9Q86YJ5 346 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 ARIH2OSQ8N7S6 290 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 MRPL43Q8N983 215 aaKnown RBP16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 FERD3LQ96RJ6 166 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 SLA2Q9H6Q3 261 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 EQTNQ9NQ60 294 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 LIPT1Q9Y234 373 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 NTNG1Q9Y2I2 539 aa16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.04■□□□□ 0.16
SLC52A1-201ENST00000254853 ANTXRLA6NF34 631 aa16.03■□□□□ 0.16
SLC52A1-201ENST00000254853 ADH1CP00326 375 aa16.03■□□□□ 0.16
SLC52A1-201ENST00000254853 HLA-DQB1P01920 261 aa16.03■□□□□ 0.16
SLC52A1-201ENST00000254853 PSKH1P11801 424 aa16.03■□□□□ 0.16
SLC52A1-201ENST00000254853 CPN2P22792 545 aa16.03■□□□□ 0.16
SLC52A1-201ENST00000254853 TRIM23P36406 574 aa16.03■□□□□ 0.16
SLC52A1-201ENST00000254853 BCL6P41182 706 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms