RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 SLBPQ14493 270 aaKnown RBP eCLIP3.92□□□□□ -1.78
UBE4A-201ENST00000252108 ATAT1Q5SQI0 421 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 METTL11BQ5VVY1 283 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 SERPINA13PQ6UXR4 307 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 TRMT11Q7Z4G4 463 aaKnown RBP3.92□□□□□ -1.78
UBE4A-201ENST00000252108 KRT77Q7Z794 578 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF485Q8NCK3 441 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 OR5T2Q8NGG2 359 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 OR2A12Q8NGT7 310 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 ARMC5Q96C12 935 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 MSLNLQ96KJ4 702 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 SLC25A19Q9HC21 320 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 FGF20Q9NP95 211 aaPredicted RBP3.92□□□□□ -1.78
UBE4A-201ENST00000252108 ACSS1Q9NUB1 689 aaPredicted RBP3.92□□□□□ -1.78
UBE4A-201ENST00000252108 EXTL2Q9UBQ6 330 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 STON1Q9Y6Q2 735 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 WDFY3Q8IZQ1 3526 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 SLC22A31A6NKX4 558 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 ISM1B1AKI9 464 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 M0R082 166 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 DLL1O00548 723 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 TLX2O43763 284 aaPredicted RBP3.92□□□□□ -1.78
UBE4A-201ENST00000252108 APOL3O95236 402 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 EPPINO95925 133 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 LAMP1P11279 417 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 CHMP24386 653 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 DNASE1P24855 282 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 ACADLP28330 430 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 TLX1P31314 330 aaPredicted RBP3.92□□□□□ -1.78
UBE4A-201ENST00000252108 KCNJ5P48544 419 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 GBX2P52951 348 aaPredicted RBP3.92□□□□□ -1.78
UBE4A-201ENST00000252108 P2RX3P56373 397 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 SRP54P61011 504 aaKnown RBP3.92□□□□□ -1.78
UBE4A-201ENST00000252108 EIF5AP63241 154 aaKnown RBP3.92□□□□□ -1.78
UBE4A-201ENST00000252108 CSTF1Q05048 431 aaKnown RBP3.92□□□□□ -1.78
UBE4A-201ENST00000252108 MXD1Q05195 221 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 TNK1Q13470 666 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 TMEM35AQ53FP2 167 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 YIF1BQ5BJH7 314 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 KIAA1161Q6NSJ0 714 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 PRICKLE2Q7Z3G6 844 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 FAM220AQ7Z4H9 259 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 SLC44A3Q8N4M1 653 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 YIPF7Q8N8F6 280 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 DUSP18Q8NEJ0 188 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 OR9A1PQ8NGU1 263 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 PRRC1Q96M27 445 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 OR2A14Q96R47 310 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 CENPOQ9BU64 300 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 TAPBPLQ9BX59 468 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 PINK1Q9BXM7 581 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 SAP130Q9H0E3 1048 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 ATG10Q9H0Y0 220 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 SYNPO2LQ9H987 977 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 ATP13A2Q9NQ11 1180 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 TAS2R8Q9NYW2 309 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 DNAJC27Q9NZQ0 273 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 COMMD9Q9P000 198 aa3.92□□□□□ -1.78
UBE4A-201ENST00000252108 TRAPPC13A5PLN9 417 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 C5orf67F2Z3F1 127 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CTDSP2O14595 271 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SEC14L5O43304 696 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 H2AFB2P0C5Z0 115 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 EPCAMP16422 314 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 RPL17P18621 184 aaKnown RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 POLR2CP19387 275 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SDHBP21912 280 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CBLP22681 906 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 MAPK3P27361 379 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 RCVRNP35243 200 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CAPZA1P52907 286 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 NKX2-5P52952 324 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 MESP2Q0VG99 397 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CATSPEREQ5SY80 951 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 LIPKQ5VXJ0 399 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CNIH2Q6PI25 160 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 MRGPREQ86SM8 312 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF547Q8IVP9 402 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CELF2-AS1Q8N7Q2 184 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ATP6V1C2Q8NEY4 427 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 OR7G3Q8NG95 312 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 GDF15Q99988 308 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF649Q9BS31 505 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TMEM168Q9H0V1 697 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ZDHHC6Q9H6R6 413 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 C12orf10Q9HB07 376 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TXNL4BQ9NX01 149 aaKnown RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SLCO3A1Q9UIG8 710 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ICKQ9UPZ9 632 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SH2B3Q9UQQ2 575 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 LSM2Q9Y333 95 aaKnown RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 DAPL1A0PJW8 107 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TMEM202A6NGA9 273 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 OR2AG2A6NM03 316 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PCDH17O14917 1159 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF780AO75290 641 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 KHDRBS3O75525 346 aaKnown RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TPPPO94811 219 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 AGTR1P30556 359 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 BUD31P41223 144 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms