RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 SLC35A4Q96G79 324 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 BTBD9Q96Q07 612 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 ACPTQ9BZG2 426 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 OR2B2Q9GZK3 357 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 CCM2LQ9NUG4 571 aaPredicted RBP19.17■□□□□ 0.66
NEDD8-201ENST00000250495 ST6GALNAC2Q9UJ37 374 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 MED12Q93074 2177 aa19.17■□□□□ 0.66
NEDD8-201ENST00000250495 PRRC2AP48634 2157 aaKnown RBP19.16■□□□□ 0.66
NEDD8-201ENST00000250495 ENO1P06733 434 aaKnown RBP19.16■□□□□ 0.66
NEDD8-201ENST00000250495 EPXP11678 715 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 MPIP34949 423 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 GSTM5P46439 218 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 AGFG1P52594 562 aaKnown RBP19.16■□□□□ 0.66
NEDD8-201ENST00000250495 RAE1P78406 368 aaKnown RBP19.16■□□□□ 0.66
NEDD8-201ENST00000250495 HMGCS1Q01581 520 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 EFR3AQ14156 821 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 FAM219BQ5XKK7 198 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 SCIMPQ6UWF3 145 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 CDC20BQ86Y33 519 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 TRIM42Q8IWZ5 723 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 IFT20Q8IY31 132 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 CEP112Q8N8E3 955 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 ACMSDQ8TDX5 336 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 C16orf78Q8WTQ4 265 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 KAT2AQ92830 837 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 APIPQ96GX9 242 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 ZFP3Q96NJ6 502 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 ADOQ96SZ5 270 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 SHCBP1LQ9BZQ2 653 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 CXXC4Q9H2H0 198 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 SLC35C2Q9NQQ7 365 aa19.16■□□□□ 0.66
NEDD8-201ENST00000250495 KIAA1549Q9HCM3 1950 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 ERN1O75460 977 aaKnown RBP19.15■□□□□ 0.66
NEDD8-201ENST00000250495 GSTA1P08263 222 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 TMIGD3P0DMS9 266 aaPredicted RBP19.15■□□□□ 0.66
NEDD8-201ENST00000250495 CT45A8P0DMV1 189 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 CT45A9P0DMV2 189 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 DNASE1P24855 282 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 TACR1P25103 407 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 SRD5A2P31213 254 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 TIA1P31483 386 aaKnown RBP eCLIP19.15■□□□□ 0.66
NEDD8-201ENST00000250495 DGKQP52824 942 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 PNLIPRP2P54317 469 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 LCP2Q13094 533 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 CEBPEQ15744 281 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 CT45A2Q5DJT8 189 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 GALNT18Q6P9A2 607 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 IFNEQ86WN2 208 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 C9orf106Q8NAJ2 232 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 OR9A2Q8NGT5 310 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 RDH11Q8TC12 318 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 L3HYPDHQ96EM0 354 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 TM9SF2Q99805 663 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 TUBA1CQ9BQE3 449 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 STMN4Q9H169 189 aaPredicted RBP19.15■□□□□ 0.66
NEDD8-201ENST00000250495 LIME1Q9H400 295 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 ANKRA2Q9H9E1 313 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 TAS2R10Q9NYW0 307 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 TAS2R9Q9NYW1 312 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 JKAMPQ9P055 326 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 CBLCQ9ULV8 474 aa19.15■□□□□ 0.66
NEDD8-201ENST00000250495 MRPS18CQ9Y3D5 142 aaKnown RBP19.15■□□□□ 0.66
NEDD8-201ENST00000250495 ITPR3Q14573 2671 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 SERTM1A2A2V5 107 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 EEF1E1-BLOC1S5C9J1V9 151 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 H0Y3Z8 333 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 EEF1E1O43324 174 aaKnown RBP19.14■□□□□ 0.65
NEDD8-201ENST00000250495 RIPK2O43353 540 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 PLOD3O60568 738 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 TSPAN2O60636 221 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 RCBTB2O95199 551 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 CD99P14209 185 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 IL12BP29460 328 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 SLCO1A2P46721 670 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 MRPS22P82650 360 aaKnown RBP19.14■□□□□ 0.65
NEDD8-201ENST00000250495 SORDQ00796 357 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 SRYQ05066 204 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 BTKQ06187 659 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 FBXW10Q5XX13 1052 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 AAGABQ6PD74 315 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 LARP4Q71RC2 724 aaKnown RBP eCLIP19.14■□□□□ 0.652e-13■■■■■ 29.6
NEDD8-201ENST00000250495 WNT2BQ93097 391 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 VSTM2LQ96N03 204 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 UCN2Q96RP3 112 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 SIRT5Q9NXA8 310 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 SENP1Q9P0U3 644 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 DCDC2Q9UHG0 476 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 TIMM22Q9Y584 194 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 WIF1Q9Y5W5 379 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 ABCA4P78363 2273 aa19.14■□□□□ 0.65
NEDD8-201ENST00000250495 SETD2Q9BYW2 2564 aaPredicted RBP19.14■□□□□ 0.65
NEDD8-201ENST00000250495 MTORP42345 2549 aa19.13■□□□□ 0.65
NEDD8-201ENST00000250495 ANXA4P09525 319 aaPredicted RBP19.13■□□□□ 0.65
NEDD8-201ENST00000250495 HTR6P50406 440 aa19.13■□□□□ 0.65
NEDD8-201ENST00000250495 GFRA1P56159 465 aa19.13■□□□□ 0.65
NEDD8-201ENST00000250495 CORO7P57737 925 aa19.13■□□□□ 0.65
NEDD8-201ENST00000250495 EEF1A1P68104 462 aaKnown RBP19.13■□□□□ 0.65
NEDD8-201ENST00000250495 EEF1A1P5Q5VTE0 462 aa19.13■□□□□ 0.65
NEDD8-201ENST00000250495 ADGRE4PQ86SQ3 457 aa19.13■□□□□ 0.65
NEDD8-201ENST00000250495 FAM9CQ8IZT9 166 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms