RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 RHNO1Q9BSD3 238 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 BCO1Q9HAY6 547 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 CALML5Q9NZT1 146 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 STYXL1Q9Y6J8 313 aa12.24□□□□□ -0.45
VAMP4-201ENST00000236192 B4GALT5O43286 388 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 PNPP00491 289 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 RAB6AP20340 208 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 RBP2P50120 134 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 ARF3P61204 181 aaPredicted RBP12.23□□□□□ -0.45
VAMP4-201ENST00000236192 ARF1P84077 181 aaKnown RBP12.23□□□□□ -0.45
VAMP4-201ENST00000236192 PCGF3Q3KNV8 242 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 REEP3Q6NUK4 255 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 RPTNQ6XPR3 784 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 RELL2Q8NC24 303 aaPredicted RBP12.23□□□□□ -0.45
VAMP4-201ENST00000236192 FBXO15Q8NCQ5 510 aaPredicted RBP12.23□□□□□ -0.45
VAMP4-201ENST00000236192 DNAAF1Q8NEP3 725 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 OR7D4Q8NG98 312 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 FAM151AQ8WW52 585 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 TSGA13Q96PP4 275 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 SORCS2Q96PQ0 1159 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 GABARAPL3Q9BY60 117 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 CIPCQ9C0C6 399 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 PRODHO43272 600 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 AQP8O94778 261 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 OR6A2O95222 327 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 BCHEP06276 602 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 GRM5P41594 1212 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 ALDH3B1P43353 468 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 MTNR1BP49286 362 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 RBM39Q14498 530 aaKnown RBP12.23□□□□□ -0.45
VAMP4-201ENST00000236192 MAPK14Q16539 360 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 PLEKHN1Q494U1 663 aaPredicted RBP12.23□□□□□ -0.45
VAMP4-201ENST00000236192 BEX5Q5H9J7 111 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 SIRPB2Q5JXA9 342 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 FRG2Q64ET8 278 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 TNFAIP8L2Q6P589 184 aaPredicted RBP12.23□□□□□ -0.45
VAMP4-201ENST00000236192 METTL7BQ6UX53 244 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 IL20RBQ6UXL0 311 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 JAZF1Q86VZ6 243 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 ACBD7Q8N6N7 88 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 TRAPPC12Q8WVT3 735 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 SLC41A3Q96GZ6 507 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 FRG2BQ96QU4 278 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 ZDHHC5Q9C0B5 715 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 NXF2Q9GZY0 626 aaKnown RBP12.23□□□□□ -0.45
VAMP4-201ENST00000236192 SLC32A1Q9H598 525 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 ACKR4Q9NPB9 350 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 RNF215Q9Y6U7 377 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 ENPP4Q9Y6X5 453 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 CLDN5O00501 218 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 HRO43593 1189 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 RDH16O75452 317 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 SPP1P10451 314 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 IL1RNP18510 177 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 CSF2RBP32927 897 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 SP140Q13342 867 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 TANGO2Q6ICL3 276 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 NANOGP1Q8N7R0 232 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 SLC35F5Q8WV83 523 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 FAIM2Q9BWQ8 316 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 DLL4Q9NR61 685 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 IFNA21P01568 189 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 GKP32189 559 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 CLCNKAP51800 687 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 CLDN10P78369 228 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 LRRC70Q7Z2Q7 622 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 MCATQ8IVS2 390 aaKnown RBP12.23□□□□□ -0.45
VAMP4-201ENST00000236192 CHST13Q8NET6 341 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 C12orf42Q96LP6 360 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 PHB2Q99623 299 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 PIGQQ9BRB3 760 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 DDX31Q9H8H2 851 aaKnown RBP12.23□□□□□ -0.45
VAMP4-201ENST00000236192 IKZF2Q9UKS7 526 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 SCML2Q9UQR0 700 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 V9GYH0 126 aa12.23□□□□□ -0.45
VAMP4-201ENST00000236192 CA12O43570 354 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 LPLP06858 475 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 PBX3P40426 434 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 SLC27A1Q6PCB7 646 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 STEAP2Q8NFT2 490 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 CDKN2AIPNLQ96HQ2 116 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 MEGF10Q96KG7 1140 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 CCDC86Q9H6F5 360 aaKnown RBP12.22□□□□□ -0.45
VAMP4-201ENST00000236192 ACSS1Q9NUB1 689 aaPredicted RBP12.22□□□□□ -0.45
VAMP4-201ENST00000236192 CYP8B1Q9UNU6 501 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 SNED1Q8TER0 1413 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 LINC00587B1AMM8 73 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 TXNDC12O95881 172 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 BDKRB1P46663 353 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 RFX3P48380 749 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 ERVPABLB-1P60509 514 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 OR2B11Q5JQS5 317 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 FAM111BQ6SJ93 734 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 FAM151BQ6UXP7 276 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 SCMH1Q96GD3 660 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 TCEAL2Q9H3H9 227 aaPredicted RBP12.22□□□□□ -0.45
VAMP4-201ENST00000236192 KDM3BQ7LBC6 1761 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 ABCD4O14678 606 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 MGMTP16455 207 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 CNR1P21554 472 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms