RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 ADGRF3Q8IZF5 1079 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 TCEANCQ8N8B7 351 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 OR6M1Q8NGM8 313 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 CXorf40BQ96DE9 158 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 NIPAL2Q9H841 368 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 MYNNQ9NPC7 610 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 CNOT2Q9NZN8 540 aaKnown RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 MLXQ9UH92 298 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 DYRK1BQ9Y463 629 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 PCDHGA9Q9Y5G4 932 aaKnown RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 AP1M2Q9Y6Q5 423 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 V9GYH0 126 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 TP53BP1Q12888 1972 aaPredicted RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 SH3D21A4FU49 640 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 HEPACAM2A8MVW5 462 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 NCR1O76036 304 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 CXCL10P02778 98 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 ELFN1P0C7U0 828 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 XPAP23025 273 aaPredicted RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 ELAVL4P26378 380 aaKnown RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 MAZP56270 477 aaKnown RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 B2MP61769 119 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 COL9A2Q14055 689 aaPredicted RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 SPHARQ15513 63 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 REEP3Q6NUK4 255 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 MTFR2Q6P444 385 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 XKRXQ6PP77 449 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 ZNF782Q6ZMW2 699 aaPredicted RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 KLHDC8AQ8IYD2 350 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 LRRC56Q8IYG6 542 aaPredicted RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 SRFBP1Q8NEF9 429 aaKnown RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 C9orf43Q8TAL5 461 aaPredicted RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 UPRTQ96BW1 309 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 TMEM19Q96HH6 336 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 MRGPRX3Q96LB0 322 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 MVB12BQ9H7P6 319 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 LIN7BQ9HAP6 207 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 ADAM30Q9UKF2 790 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 MAPRE3Q9UPY8 281 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 ANGPT4Q9Y264 503 aa8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 SPIN1Q9Y657 262 aaPredicted RBP8.87□□□□□ -0.99
HLA-DOA-201ENST00000229829 A8MVJ9 347 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 WASH3PC4AMC7 463 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 FOXE1O00358 373 aaPredicted RBP8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 PLA2G10O15496 165 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 PPM1BO75688 479 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 RGS11O94810 467 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 C8AP07357 584 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 SYN1P17600 705 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 COX10Q12887 443 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 HSPB3Q12988 150 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 PIN1Q13526 163 aaPredicted RBP8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 CNIH2Q6PI25 160 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 NXPE4Q6UWF7 544 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 LINC00518Q8N0U6 118 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 IRF7Q92985 503 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 TIFAQ96CG3 184 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 FAM83CQ9BQN1 747 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 ANKRA2Q9H9E1 313 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 CTPS2Q9NRF8 586 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 NUDT15Q9NV35 164 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 KCND3Q9UK17 655 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 EDARQ9UNE0 448 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 COPS3Q9UNS2 423 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 TCF20Q9UGU0 1960 aaKnown RBP8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 VCANP13611 3396 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 TCRBV16S1A1N1A0A5B0 115 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 OR5K3A6NET4 321 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 M0R233 179 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 FKTNO75072 461 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 SOD1P00441 154 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 IFNA14P01570 189 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 OSMP13725 252 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 DNASE1P24855 282 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 IRS1P35568 1242 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 PSPHP78330 225 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 GRK1Q15835 563 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 TUSC1Q2TAM9 212 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 ZNF658BQ4V348 819 aaPredicted RBP8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 USP30Q70CQ3 517 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 TRIM69Q86WT6 500 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 SLC7A13Q8TCU3 470 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 REPS1Q96D71 796 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 PDXPQ96GD0 296 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 F2RL3Q96RI0 385 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 EFCAB11Q9BUY7 163 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 ZNF416Q9BWM5 594 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 SGPP1Q9BX95 441 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 NLNQ9BYT8 704 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 TTYH1Q9H313 450 aaPredicted RBP8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 IFT22Q9H7X7 185 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 TVP23BQ9NYZ1 205 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 COPZ2Q9P299 210 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 KLHL21Q9UJP4 597 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 DIMT1Q9UNQ2 313 aaKnown RBP8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 A0A0G2JN53 185 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 PRAMEF27A3QJZ7 478 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 ZNF98A6NK75 572 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 PLPP1O14494 284 aa8.86□□□□□ -0.99
HLA-DOA-201ENST00000229829 SLC30A4O14863 429 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms