RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 TARDBPQ13148 414 aaKnown RBP eCLIP16.49■□□□□ 0.23
GCDH-201ENST00000222214 FAM53BQ14153 422 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 PRICKLE4Q2TBC4 344 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 INAVAQ3KP66 663 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 PODNL1Q6PEZ8 512 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 FRRS1Q6ZNA5 592 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 AHSA2Q719I0 299 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 ANKRD13BQ86YJ7 626 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 TOR1AIP2Q8NFQ8 470 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 OR5T3Q8NGG3 340 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 TRUB1Q8WWH5 349 aaKnown RBP16.49■□□□□ 0.23
GCDH-201ENST00000222214 SLC38A4Q969I6 547 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 HSPA12BQ96MM6 686 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 WFDC6Q9BQY6 131 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 POLR2J3Q9H1A7 115 aaKnown RBP16.49■□□□□ 0.23
GCDH-201ENST00000222214 ACOT13Q9NPJ3 140 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 TMEM74BQ9NUR3 256 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 FKBP14Q9NWM8 211 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 REV1Q9UBZ9 1251 aa16.49■□□□□ 0.23
GCDH-201ENST00000222214 COQ9O75208 318 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 ACVR2AP27037 513 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 MAOBP27338 520 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 ST13P50502 369 aaKnown RBP16.48■□□□□ 0.23
GCDH-201ENST00000222214 TAS2R41P59536 307 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 ST3GAL3Q11203 375 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 DUSP8Q13202 625 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 DUSP5Q16690 384 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 TRMT12Q53H54 448 aaKnown RBP16.48■□□□□ 0.23
GCDH-201ENST00000222214 OLIG3Q7RTU3 272 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 TMEFF1Q8IYR6 380 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 CTHRC1Q96CG8 243 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 ZNF285Q96NJ3 590 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 CD180Q99467 661 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 FUNDC2Q9BWH2 189 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 ZNF350Q9GZX5 532 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 POLE3Q9NRF9 147 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 MAN2C1Q9NTJ4 1040 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 MAT2BQ9NZL9 334 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 PLCL2Q9UPR0 1127 aa16.48■□□□□ 0.23
GCDH-201ENST00000222214 TLCD2A6NGC4 264 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 CHST10O43529 356 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 RDH16O75452 317 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 INMTO95050 263 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 ACP2P11117 423 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 RNH1P13489 461 aaKnown RBP16.47■□□□□ 0.23
GCDH-201ENST00000222214 TRAM2Q15035 370 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 TBCEQ15813 527 aaPredicted RBP16.47■□□□□ 0.23
GCDH-201ENST00000222214 C14orf28Q4W4Y0 310 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 TCTE1Q5JU00 501 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 SLX4IPQ5VYV7 408 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 TYW3Q6IPR3 259 aaKnown RBP16.47■□□□□ 0.23
GCDH-201ENST00000222214 C1orf94Q6P1W5 598 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 VRK2Q86Y07 508 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 CCDC103Q8IW40 242 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 TMEM52Q8NDY8 209 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 OR4K5Q8NGD3 323 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 OR9A4Q8NGU2 314 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 C1orf216Q8TAB5 229 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 ANKRD9Q96BM1 317 aaPredicted RBP16.47■□□□□ 0.23
GCDH-201ENST00000222214 Q96MT0 163 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 SDF2Q99470 211 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 MAP3K3Q99759 626 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 POLR2J2Q9GZM3 115 aaKnown RBP16.47■□□□□ 0.23
GCDH-201ENST00000222214 NAA50Q9GZZ1 169 aaKnown RBP16.47■□□□□ 0.23
GCDH-201ENST00000222214 QRSL1Q9H0R6 528 aaKnown RBP16.47■□□□□ 0.23
GCDH-201ENST00000222214 EVA1AQ9H8M9 152 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 ADAP2Q9NPF8 381 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 STARD5Q9NSY2 213 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 CLN6Q9NWW5 311 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 ENPP5Q9UJA9 477 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 ZNF443Q9Y2A4 671 aaPredicted RBP16.47■□□□□ 0.23
GCDH-201ENST00000222214 FAM227AF5H4B4 570 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 AP3D1O14617 1153 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 STX11O75558 287 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 CDK1P06493 297 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 CCNYL3P0C7X3 344 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 SOX18P35713 384 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 ID2Q02363 134 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 DEFB110Q30KQ9 67 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 PTCHD4Q6ZW05 846 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 CARFQ8N187 725 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 MORN4Q8NDC4 146 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 DNASE2BQ8WZ79 361 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 SAP130Q9H0E3 1048 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 TBC1D17Q9HA65 648 aa16.47■□□□□ 0.23
GCDH-201ENST00000222214 CNOT2Q9NZN8 540 aaKnown RBP16.47■□□□□ 0.23
GCDH-201ENST00000222214 HYKKA2RU49 373 aa16.46■□□□□ 0.23
GCDH-201ENST00000222214 EFCAB10A6NFE3 127 aa16.46■□□□□ 0.23
GCDH-201ENST00000222214 HCRTR1O43613 425 aa16.46■□□□□ 0.23
GCDH-201ENST00000222214 FCMRO60667 390 aa16.46■□□□□ 0.23
GCDH-201ENST00000222214 CYP7B1O75881 506 aa16.46■□□□□ 0.23
GCDH-201ENST00000222214 NSA2O95478 260 aaKnown RBP16.46■□□□□ 0.23
GCDH-201ENST00000222214 FADS2O95864 444 aaKnown RBP16.46■□□□□ 0.23
GCDH-201ENST00000222214 DBIP07108 87 aaKnown RBP16.46■□□□□ 0.23
GCDH-201ENST00000222214 CNR2P34972 360 aa16.46■□□□□ 0.23
GCDH-201ENST00000222214 MLLT3P42568 568 aaPredicted RBP16.46■□□□□ 0.23
GCDH-201ENST00000222214 C21orf59P57076 290 aa16.46■□□□□ 0.23
GCDH-201ENST00000222214 RGS8P57771 180 aaPredicted RBP16.46■□□□□ 0.23
GCDH-201ENST00000222214 SNRPGP62308 76 aaKnown RBP16.46■□□□□ 0.23
GCDH-201ENST00000222214 MAP4K2Q12851 820 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms