RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 MAP2K4P45985 399 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 MPP2Q14168 576 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 TRAM2Q15035 370 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 TPRG1LQ5T0D9 272 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 ZFAND4Q86XD8 727 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 FAM217AQ8IXS0 508 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 RSC1A1Q92681 617 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 CCDC86Q9H6F5 360 aaKnown RBP12.99□□□□□ -0.33
SIX4-201ENST00000216513 LIPT1Q9Y234 373 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 PLSCR5A0PG75 271 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 WRBO00258 174 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 AK1P00568 194 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 SMCO1Q147U7 214 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 CTC1Q2NKJ3 1217 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 SYCE2Q6PIF2 218 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 IGFN1Q86VF2 1251 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 P2RY8Q86VZ1 359 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 ZNF440Q8IYI8 595 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 CCL4L1Q8NHW4 92 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 RHEBL1Q8TAI7 183 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 HSH2DQ96JZ2 352 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 SSU72Q9NP77 194 aaKnown RBP12.99□□□□□ -0.33
SIX4-201ENST00000216513 GPR83Q9NYM4 423 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 FBXL3Q9UKT7 428 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 CCNKO75909 580 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 BCKDHAP12694 445 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 VBP1P61758 197 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 SCGB2B2Q4G0G5 96 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 AKAP14Q86UN6 197 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 CROCCP3Q8IVE0 287 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 CNIH3Q8TBE1 160 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 CIDECQ96AQ7 238 aaPredicted RBP12.99□□□□□ -0.33
SIX4-201ENST00000216513 NANSQ9NR45 359 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 VNN3Q9NY84 501 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 TBC1D29Q9UFV1 150 aa12.99□□□□□ -0.33
SIX4-201ENST00000216513 A0A1B0GX78 115 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 H7C0S8 307 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 B4GALT3O60512 393 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 ARHGAP19Q14CB8 494 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 TSTQ16762 297 aaKnown RBP12.98□□□□□ -0.33
SIX4-201ENST00000216513 CYBRD1Q53TN4 286 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 HES3Q5TGS1 186 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 SPNS2Q8IVW8 549 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 ZNF480Q8WV37 535 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 TCEAL3Q969E4 200 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 ACTRT3Q9BYD9 372 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 FKBP7Q9Y680 259 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 UBR3Q6ZT12 1888 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 GSTM3P21266 225 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 CFL1P23528 166 aaKnown RBP12.98□□□□□ -0.33
SIX4-201ENST00000216513 VWA2Q5GFL6 755 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 CARM1Q86X55 608 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 POLR2J2Q9GZM3 115 aaKnown RBP12.98□□□□□ -0.33
SIX4-201ENST00000216513 TMEM5Q9Y2B1 443 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 ABCA3Q99758 1704 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 PRAMEF33A0A0G2JMD5 474 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 PRAMEF10O60809 474 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 TNFSF4P23510 183 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 CSNK2A1P68400 391 aaPredicted RBP12.98□□□□□ -0.33
SIX4-201ENST00000216513 GALNT1Q10472 559 aaPredicted RBP12.98□□□□□ -0.33
SIX4-201ENST00000216513 CNPY1Q3B7I2 92 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 C6orf136Q5SQH8 315 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 SHFQ7M4L6 423 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 ERI1Q8IV48 349 aaKnown RBP12.98□□□□□ -0.33
SIX4-201ENST00000216513 NAXDQ8IW45 347 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 TIGD4Q8IY51 512 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 UCN3Q969E3 161 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 ENKD1Q9H0I2 346 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 DMRT3Q9NQL9 472 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 EMC3Q9P0I2 261 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 FETUBQ9UGM5 382 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 A0A1W2PQ72 361 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 STMND1H3BQB6 276 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 ABLIM1O14639 778 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 MPZL2O60487 215 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 PGAM2P15259 253 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 MAGEA8P43361 318 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 GSCP56915 257 aaPredicted RBP12.98□□□□□ -0.33
SIX4-201ENST00000216513 UGT8Q16880 541 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 SMRP1Q8NCR6 262 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 OR14A16Q8NHC5 309 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 GOT1L1Q8NHS2 421 aaPredicted RBP12.98□□□□□ -0.33
SIX4-201ENST00000216513 SLCO2A1Q92959 643 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 RDH12Q96NR8 316 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 ALPK1Q96QP1 1244 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 ADAMTS6Q9UKP5 1117 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 SCAMP2O15127 329 aaKnown RBP12.98□□□□□ -0.33
SIX4-201ENST00000216513 TLX2O43763 284 aaPredicted RBP12.98□□□□□ -0.33
SIX4-201ENST00000216513 TRMUO75648 421 aaKnown RBP12.98□□□□□ -0.33
SIX4-201ENST00000216513 UNC50Q53HI1 259 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 CCDC80Q76M96 950 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 OR7G3Q8NG95 312 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 MAL2Q969L2 176 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 PTERQ96BW5 349 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 SLC7A11Q9UPY5 501 aa12.98□□□□□ -0.33
SIX4-201ENST00000216513 DOCK1Q14185 1865 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 PLRG1O43660 514 aaKnown RBP12.97□□□□□ -0.33
SIX4-201ENST00000216513 ALOX12BO75342 701 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 CD36P16671 472 aa12.97□□□□□ -0.33
SIX4-201ENST00000216513 APIPQ96GX9 242 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms