RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 PIAS3Q9Y6X2 628 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 A6NLC8 198 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 GMPRP36959 345 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 BMXP51813 675 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 CTXN1P60606 82 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 LEG1Q6P5S2 330 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 KDELC1Q6UW63 502 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 USP53Q70EK8 1073 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 SHFQ7M4L6 423 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 SCD5Q86SK9 330 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 NAGSQ8N159 534 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 MAFIPQ8WZ33 124 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 DIO2Q92813 273 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 MAL2Q969L2 176 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 TCEAL4Q96EI5 215 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 TMEM246Q9BRR3 403 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 ARHGAP9Q9BRR9 750 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 NELFAQ9H3P2 528 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF442Q9H7R0 627 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF175Q9Y473 711 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 MBLAC1A4D2B0 266 aaPredicted RBP12.87□□□□□ -0.35
SF3A1-201ENST00000215793 KIAA0355O15063 1070 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 MAGEA6P43360 314 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 PITPNBP48739 271 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 NETO1Q8TDF5 533 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 TMEM68Q96MH6 324 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 KLHL42Q9P2K6 505 aa12.87□□□□□ -0.35
SF3A1-201ENST00000215793 ANTXRLA6NF34 631 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 MEIS3P2A8K0S8 358 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 PTTG1O95997 202 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 P04436 131 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 TFPTP0C1Z6 253 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 HNRNPA2B1P22626 353 aaKnown RBP12.86□□□□□ -0.35
SF3A1-201ENST00000215793 POU3F4P49335 361 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 LSAMPQ13449 338 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 MLC1Q15049 377 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 DTWD1Q8N5C7 304 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 ZFP41Q8N8Y5 198 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 PTERQ96BW5 349 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 MYH2Q9UKX2 1941 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 WASH4PA8MWX3 477 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 RNASET2O00584 256 aaKnown RBP12.86□□□□□ -0.35
SF3A1-201ENST00000215793 THEGLP0DJG4 465 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 RNF144AP50876 292 aaPredicted RBP12.86□□□□□ -0.35
SF3A1-201ENST00000215793 SLC26A5P58743 744 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 TDGQ13569 410 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF542PQ5EBM4 170 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 ANKK1Q8NFD2 765 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 GPN2Q9H9Y4 310 aaPredicted RBP12.86□□□□□ -0.35
SF3A1-201ENST00000215793 RNF186Q9NXI6 227 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 RIMS3Q9UJD0 308 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 COL2A1P02458 1487 aaPredicted RBP12.86□□□□□ -0.35
SF3A1-201ENST00000215793 CASC3O15234 703 aaKnown RBP12.86□□□□□ -0.35
SF3A1-201ENST00000215793 RPS17P08708 135 aaKnown RBP12.86□□□□□ -0.35
SF3A1-201ENST00000215793 PRSS56P0CW18 603 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 GRPRP30550 384 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 PCGF2P35227 344 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 FAM189BP81408 668 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 C18orf21Q32NC0 220 aaPredicted RBP12.86□□□□□ -0.35
SF3A1-201ENST00000215793 MPP7Q5T2T1 576 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 IER5LQ5T953 404 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 FAM205BPQ63HN1 556 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 LCTLQ6UWM7 567 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 PITHD1Q9GZP4 211 aaPredicted RBP12.86□□□□□ -0.35
SF3A1-201ENST00000215793 NMNAT1Q9HAN9 279 aaPredicted RBP12.86□□□□□ -0.35
SF3A1-201ENST00000215793 FZD3Q9NPG1 666 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 ERVK13-1Q9NX77 482 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF226Q9NYT6 803 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 KLHL9Q9P2J3 617 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 EBF1Q9UH73 591 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 MAS1P04201 325 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 INHBCP55103 352 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 WNT7BP56706 349 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 NCS1P62166 190 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 CPZQ66K79 652 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 PNCKQ6P2M8 343 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 DDIT4LQ96D03 193 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 ZFP57Q9NU63 452 aa12.86□□□□□ -0.35
SF3A1-201ENST00000215793 LAMTOR5O43504 91 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 DNAJB6O75190 326 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 TOXO94900 526 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 IFNA1P01562 189 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 PROS1P07225 676 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 WNT4P56705 351 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 FOXK1P85037 733 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 KEAP1Q14145 624 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF791Q3KP31 576 aaPredicted RBP12.85□□□□□ -0.35
SF3A1-201ENST00000215793 CCDC58Q4VC31 144 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ATAD3CQ5T2N8 411 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 BCL2L15Q5TBC7 163 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF852Q6ZMS4 543 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 PAPD5Q8NDF8 572 aaKnown RBP12.85□□□□□ -0.35
SF3A1-201ENST00000215793 CHDHQ8NE62 594 aaPredicted RBP12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ISG20Q96AZ6 181 aaKnown RBP12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF300Q96RE9 604 aaPredicted RBP12.85□□□□□ -0.35
SF3A1-201ENST00000215793 SYT3Q9BQG1 590 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 SPATA6Q9NWH7 488 aaPredicted RBP12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ZDHHC7Q9NXF8 308 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 NPIPB15A6NHN6 443 aaPredicted RBP12.85□□□□□ -0.35
SF3A1-201ENST00000215793 GJE1A6NN92 205 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms