RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 PGAM5Q96HS1 289 aa11.93□□□□□ -0.5
LMCD1-201ENST00000157600 PDLIM7Q9NR12 457 aa11.93□□□□□ -0.5
LMCD1-201ENST00000157600 VNN3Q9NY84 501 aa11.93□□□□□ -0.5
LMCD1-201ENST00000157600 NUBP2Q9Y5Y2 271 aa11.93□□□□□ -0.5
LMCD1-201ENST00000157600 SLC22A7Q9Y694 548 aa11.93□□□□□ -0.5
LMCD1-201ENST00000157600 ARNTLO00327 626 aa11.93□□□□□ -0.5
LMCD1-201ENST00000157600 NDUFB2O95178 105 aa11.93□□□□□ -0.5
LMCD1-201ENST00000157600 PAK4O96013 591 aaPredicted RBP11.93□□□□□ -0.5
LMCD1-201ENST00000157600 PRKACGP22612 351 aa11.93□□□□□ -0.5
LMCD1-201ENST00000157600 RPP30P78346 268 aaKnown RBP11.93□□□□□ -0.5
LMCD1-201ENST00000157600 CST6Q15828 149 aa11.93□□□□□ -0.5
LMCD1-201ENST00000157600 SLC6A14Q9UN76 642 aa11.93□□□□□ -0.5
LMCD1-201ENST00000157600 ADAM18Q9Y3Q7 739 aa11.93□□□□□ -0.5
LMCD1-201ENST00000157600 SCN9AQ15858 1988 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 SIPA1L3O60292 1781 aaPredicted RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 A8MUA0 341 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 ANHXE9PGG2 379 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 SOCS2O14508 198 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 PAHP00439 452 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 TCEA1P23193 301 aaKnown RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 SLC6A19Q695T7 634 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 TCEAL8Q8IYN2 117 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 RNF128Q8TEB7 428 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 TAP2Q03519 686 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 OR4D1Q15615 310 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 PDZD3Q86UT5 571 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 TSNAXQ99598 290 aaKnown RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 TRPM3Q9HCF6 1732 aaPredicted RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 CCDC85CA6NKD9 419 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 SC5DO75845 299 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 S100A7P31151 101 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 OR4D2P58180 307 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 NTRK2Q16620 822 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 RNASE10Q5GAN6 216 aaKnown RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 METAP1DQ6UB28 335 aaPredicted RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 KCTD20Q7Z5Y7 419 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 SIAH1Q8IUQ4 282 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 PRRT1Q99946 306 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 LMF2Q9BU23 707 aaKnown RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 OR6C2Q9NZP2 312 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 STRCQ7RTU9 1775 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 MT-CO2P00403 227 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 SLC10A2Q12908 348 aaPredicted RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 NCCRP1Q6ZVX7 275 aaPredicted RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 IGSF8Q969P0 613 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 TRIM43Q96BQ3 446 aaPredicted RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 NT5DC2Q9H857 520 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 HEBP1Q9NRV9 189 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 ATG2BQ96BY7 2078 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 OR6C74A6NCV1 312 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 FOXE1O00358 373 aaPredicted RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 KCNK5O95279 499 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 TP53P04637 393 aaPredicted RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 DRD1P21728 446 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 CASP6P55212 293 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 MLC1Q15049 377 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 ZFC3H1O60293 1989 aaKnown RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 ADAMTSL3P82987 1691 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 RNGTTO60942 597 aaKnown RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 IVDP26440 423 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 GPR139Q6DWJ6 353 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 OR52B6Q8NGF0 335 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 PDLIM5Q96HC4 596 aaKnown RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 NSUN5Q96P11 429 aaKnown RBP11.92□□□□□ -0.5
LMCD1-201ENST00000157600 CACNG6Q9BXT2 260 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 IGSF5Q9NSI5 407 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 LAMB2P55268 1798 aa11.92□□□□□ -0.5
LMCD1-201ENST00000157600 RSU1Q15404 277 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 KDELC1Q6UW63 502 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 ZNF619Q8N2I2 560 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 OR9A4Q8NGU2 314 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 OR5AK2Q8NH90 309 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 PCDHGA7Q9Y5G6 932 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 SCN1AP35498 2009 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 FAM72CH0Y354 149 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 EGFP01133 1207 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 SYPP08247 313 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 ACRP10323 421 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 RAC2P15153 192 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 ZNF14P17017 642 aaPredicted RBP11.91□□□□□ -0.5
LMCD1-201ENST00000157600 OLIG2Q13516 323 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 FAM72AQ5TYM5 149 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 FAM72DQ6L9T8 149 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 FAM72BQ86X60 149 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 SLC41A3Q96GZ6 507 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 OR5B12Q96R08 314 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 APMAPQ9HDC9 416 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 ZNF701Q9NV72 531 aaPredicted RBP11.91□□□□□ -0.5
LMCD1-201ENST00000157600 LOC285095A0A1B0GVY8 99 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 KHNYNO15037 678 aaKnown RBP11.91□□□□□ -0.5
LMCD1-201ENST00000157600 CRYZQ08257 329 aaKnown RBP11.91□□□□□ -0.5
LMCD1-201ENST00000157600 SLC35G1Q2M3R5 365 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 PHC2Q8IXK0 858 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 PRRC1Q96M27 445 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 ZNF578Q96N58 590 aaPredicted RBP11.91□□□□□ -0.5
LMCD1-201ENST00000157600 IL23AQ9NPF7 189 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 ENPP5Q9UJA9 477 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 KIR2DS5A0A0G2JLQ3 304 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 A0A0G2JNG1 304 aa11.91□□□□□ -0.5
LMCD1-201ENST00000157600 KIR2DS3K7RE56 304 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms