RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 UCKL1Q9NWZ5 548 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 MMP17Q9ULZ9 603 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 VCANP13611 3396 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 MCIDASD6RGH6 385 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 PRAMEF26H0Y7S4 382 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 CCRL2O00421 344 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 MPZL2O60487 215 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 RDH16O75452 317 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 BCAP31P51572 246 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 ST3GAL3Q11203 375 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 KCNAB1Q14722 419 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 LTB4RQ15722 352 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 DUSP7Q16829 419 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 GFOD2Q3B7J2 385 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 C18orf63Q68DL7 685 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 SDR16C5Q8N3Y7 309 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 FBXL6Q8N531 539 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 AVL9Q8NBF6 648 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 KCTD7Q96MP8 289 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 ACTL8Q9H568 366 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 ZNF385DQ9H6B1 395 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 CXorf36Q9H7Y0 433 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 VNN3Q9NY84 501 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 TRBV5-4A0A0C4DH59 114 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 RLN1P04808 185 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 GYPBP06028 91 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 HSD3B1P14060 373 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 HSD3B2P26439 372 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 PPP1CAP62136 330 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 MVKQ03426 396 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 TMPRSS9Q7Z410 1059 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 TRIM46Q7Z4K8 759 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 OR4K14Q8NGD5 310 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 OR52E4Q8NGH9 312 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 AP3S1Q92572 193 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 TMEM80Q96HE8 168 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 C5orf34Q96MH7 638 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 USP36Q9P275 1121 aaKnown RBP11.37□□□□□ -0.59
CHPF2-201ENST00000035307 ZNF221Q9UK13 617 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 PI4KAP42356 2102 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 SIP14410 1827 aa11.37□□□□□ -0.59
CHPF2-201ENST00000035307 CTDSP2O14595 271 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 F3P13726 295 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 OR1D4P47884 311 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 SOX2P48431 317 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 PPP2R2BQ00005 443 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 TUBA3CQ13748 450 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 ALG11Q2TAA5 492 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 ZNF385BQ569K4 471 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 PRAMEF17Q5VTA0 474 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 KLBQ86Z14 1044 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 CSNK1A1LQ8N752 337 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 ACOT4Q8N9L9 421 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 GOLM1Q8NBJ4 401 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 OR5T3Q8NGG3 340 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 OR52P1PQ8NH57 321 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 OR5K2Q8NHB8 316 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 BBS10Q8TAM1 723 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 RFKQ969G6 155 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 ELL3Q9HB65 397 aaPredicted RBP11.36□□□□□ -0.59
CHPF2-201ENST00000035307 ACTR10Q9NZ32 417 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 IFNGP01579 166 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 HOXB6P17509 224 aaKnown RBP11.36□□□□□ -0.59
CHPF2-201ENST00000035307 RHCEP18577 417 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 CD22P20273 847 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 SPATS1Q496A3 300 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 SLC27A4Q6P1M0 643 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 MTFR2Q6P444 385 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 CBLL1Q75N03 491 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 SERPINA11Q86U17 422 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 RCBTB1Q8NDN9 531 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 PHOSPHO1Q8TCT1 267 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 CHIAQ9BZP6 476 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 RPRD1BQ9NQG5 326 aaKnown RBP11.36□□□□□ -0.59
CHPF2-201ENST00000035307 HEBP2Q9Y5Z4 205 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 A0A1W2PRG6 482 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 PRKAR1AP10644 381 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 PIK3CBP42338 1070 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 EXOSC7Q15024 291 aaKnown RBP11.36□□□□□ -0.59
CHPF2-201ENST00000035307 OR2G6Q5TZ20 316 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 FAM220AQ7Z4H9 259 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 ASPGQ86U10 573 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 SLC9B2Q86UD5 537 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 VRK2Q86Y07 508 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 TTLQ8NG68 377 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 SMPDL3BQ92485 455 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 SLC30A2Q9BRI3 323 aa11.36□□□□□ -0.59
CHPF2-201ENST00000035307 FNDC1Q4ZHG4 1894 aaPredicted RBP11.36□□□□□ -0.59
CHPF2-201ENST00000035307 DUXAA6NLW8 204 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 CLCA1A8K7I4 914 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 CPNE3O75131 537 aaKnown RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 KHDRBS3O75525 346 aaKnown RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 PDGFBP01127 241 aaPredicted RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 KIR2DL1P43626 348 aaPredicted RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 GPR19Q15760 415 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 MICAQ29983 383 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 FAM214AQ32MH5 1076 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 TMEM52BQ4KMG9 183 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 ZNF691Q5VV52 312 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 METRNLQ641Q3 311 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms