RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 ZFP3Q96NJ6 502 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 TMED9Q9BVK6 235 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 COMMD3Q9UBI1 195 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 YBX2Q9Y2T7 364 aaKnown RBP9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 OR2T1O43869 369 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 IGLV3-25P01717 112 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 FOXA1P55317 472 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 CSNK2A1P68400 391 aaPredicted RBP9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 ABCA11PQ4W5N1 156 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 MRGPRX1Q96LB2 322 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 TTYH2Q9BSA4 534 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 PINK1Q9BXM7 581 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 SRA1Q9HD15 236 aaKnown RBP9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 PCDHA9Q9Y5H5 950 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 SLC22A31A6NKX4 558 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 CASC3O15234 703 aaKnown RBP9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 HMGN2P05204 90 aaKnown RBP9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 ERCC1P07992 297 aaPredicted RBP9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 CCR2P41597 374 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 EIF2B2P49770 351 aaKnown RBP9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 MLLT10P55197 1068 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 TLE3Q04726 772 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 DPTQ07507 201 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 NDUFA5Q16718 116 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 DCST2Q5T1A1 773 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 Q6ZNB5 142 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 NAGSQ8N159 534 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 OR2T4Q8NH00 348 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 OR1E3Q8WZA6 343 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 PDXPQ96GD0 296 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 ING3Q9NXR8 418 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 EURLQ9NYK6 297 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 CBLCQ9ULV8 474 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 FABP12A6NFH5 140 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 SLC22A1O15245 554 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 HSD17B1P14061 328 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 GGT2P36268 569 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 EPHA4P54764 986 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 GAS6Q14393 721 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 ODF4Q2M2E3 257 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 NKAIN2Q5VXU1 208 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 OR8J1Q8NGP2 316 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 PGAM5Q96HS1 289 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 INPP5KQ9BT40 448 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 KLHL31Q9H511 634 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 KIR3DX1Q9H7L2 352 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 MBNL1Q9NR56 388 aaKnown RBP9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 SMOXQ9NWM0 555 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 CITO14578 2027 aa9.78□□□□□ -0.84
NIPAL3-201ENST00000003912 TEX13CA0A0J9YWL9 993 aa9.77□□□□□ -0.84
NIPAL3-201ENST00000003912 PHYHO14832 338 aa9.77□□□□□ -0.84
NIPAL3-201ENST00000003912 DHRS4L1P0CG22 281 aa9.77□□□□□ -0.84
NIPAL3-201ENST00000003912 SLC5A2P31639 672 aa9.77□□□□□ -0.84
NIPAL3-201ENST00000003912 SFTPDP35247 375 aa9.77□□□□□ -0.84
NIPAL3-201ENST00000003912 PTPRRQ15256 657 aa9.77□□□□□ -0.84
NIPAL3-201ENST00000003912 TMEM201Q5SNT2 666 aa9.77□□□□□ -0.84
NIPAL3-201ENST00000003912 OR5B2Q96R09 309 aa9.77□□□□□ -0.84
NIPAL3-201ENST00000003912 SLC6A16Q9GZN6 736 aa9.77□□□□□ -0.84
NIPAL3-201ENST00000003912 RPH3AQ9Y2J0 694 aaPredicted RBP9.77□□□□□ -0.84
NIPAL3-201ENST00000003912 H0YIV9 168 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 ACOX3O15254 700 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 FOXD2O60548 495 aaPredicted RBP9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 SLCO2B1O94956 709 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 ETS2P15036 469 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 PGAM2P15259 253 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 POU3F2P20265 443 aaPredicted RBP9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 CRISP1P54107 249 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 PRPS1P60891 318 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 TAP2Q03519 686 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 TSTQ16762 297 aaKnown RBP9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 PRAMEF8Q5VWM4 474 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 PRAMEF7Q5VXH5 474 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 ABHD12BQ7Z5M8 362 aaPredicted RBP9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 METTL4Q8N3J2 472 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 KIAA1958Q8N8K9 716 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 NLGN4YQ8NFZ3 816 aaPredicted RBP9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 UBTD2Q8WUN7 234 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 TMEM203Q969S6 136 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 RADILQ96JH8 1075 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 DHRS1Q96LJ7 313 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 TWSG1Q9GZX9 223 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 FGF22Q9HCT0 170 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 RXFP3Q9NSD7 469 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 ACSS1Q9NUB1 689 aaPredicted RBP9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 WNT16Q9UBV4 365 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 LRRC42Q9Y546 428 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 ENPP4Q9Y6X5 453 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 CDC14CA4D256 554 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 ZNF878C9JN71 531 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 MRPL3P09001 348 aaKnown RBP9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 KCTD21Q4G0X4 260 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 ZER1Q7Z7L7 766 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 LKAAEAR1Q8TD35 194 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 TNFAIP8L1Q8WVP5 186 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 MAL2Q969L2 176 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 BTBD2Q9BX70 525 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 WASF3Q9UPY6 502 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 COL24A1Q17RW2 1714 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 FESP07332 822 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 PCGF2P35227 344 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms