RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 THUMPD3Q9BV44 507 aaKnown RBP11.42□□□□□ -0.58
LINC00339-213ENST00000642137 LHPPQ9H008 270 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 PIGUQ9H490 435 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 DUSP22Q9NRW4 184 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 THUMPD1Q9NXG2 353 aaKnown RBP11.42□□□□□ -0.58
LINC00339-213ENST00000642137 TAS2R1Q9NYW7 299 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 PCDHGB3Q9Y5G1 929 aa11.42□□□□□ -0.58
LINC00339-213ENST00000642137 TMEM200CA6NKL6 621 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 CDK2AP1O14519 115 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 ASNA1O43681 348 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 PRKNO60260 465 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-213ENST00000642137 AGR2O95994 175 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 C1QCP02747 245 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 CELA2AP08217 269 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 ALOX5P09917 674 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 CT45A8P0DMV1 189 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 CT45A9P0DMV2 189 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 BMP2P12643 396 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 ITPKBP27987 946 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 CPOXP36551 454 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 TMPRSS3P57727 454 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 PSPHP78330 225 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 SLC25A3Q00325 362 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 DEFB109BQ30KR1 87 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 CT45A2Q5DJT8 189 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 PIGGQ5H8A4 983 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 ANGPTL8Q6UXH0 198 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 GPR155Q7Z3F1 870 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 RPS19BP1Q86WX3 136 aaKnown RBP11.41□□□□□ -0.58
LINC00339-213ENST00000642137 SLC15A3Q8IY34 581 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 LGI4Q8N135 537 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 GALNT16Q8N428 558 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 SLC15A4Q8N697 577 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 ZNF441Q8N8Z8 693 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 SLC16A11Q8NCK7 471 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 RBM15BQ8NDT2 890 aaKnown RBP11.41□□□□□ -0.58
LINC00339-213ENST00000642137 FBXO27Q8NI29 283 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 SNRNP27Q8WVK2 155 aaKnown RBP11.41□□□□□ -0.58
LINC00339-213ENST00000642137 PSMF1Q92530 271 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 SLC9A6Q92581 669 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 TMEM125Q96AQ2 219 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 SLC7A6OSQ96CW6 309 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-213ENST00000642137 SLC35A4Q96G79 324 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 AURKBQ96GD4 344 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-213ENST00000642137 THOC3Q96J01 351 aaKnown RBP11.41□□□□□ -0.58
LINC00339-213ENST00000642137 BTBD9Q96Q07 612 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 OR7D2Q96RA2 312 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 SLC39A3Q9BRY0 314 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 YIPF4Q9BSR8 244 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 ITPAQ9BY32 194 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 WWTR1Q9GZV5 400 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 ING2Q9H160 280 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 OR51I1Q9H343 314 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 KAT8Q9H7Z6 458 aaKnown RBP11.41□□□□□ -0.58
LINC00339-213ENST00000642137 EQTNQ9NQ60 294 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 MYOTQ9UBF9 498 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 DTX4Q9Y2E6 619 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 L3MBTL1Q9Y468 752 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 DOCK10Q96BY6 2186 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 CACNA1AO00555 2505 aa11.41□□□□□ -0.58
LINC00339-213ENST00000642137 MED13Q9UHV7 2174 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 FRG2CA6NGY1 282 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 TO15178 435 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 ACOX3O15254 700 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 NME6O75414 186 aaPredicted RBP11.4□□□□□ -0.58
LINC00339-213ENST00000642137 OR12D1P0DN82 309 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 ACP2P11117 423 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 ITGA3P26006 1051 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 GABRA3P34903 492 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 CRATP43155 626 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 KHKP50053 298 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 GZMMP51124 257 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 NR0B1P51843 470 aaKnown RBP11.4□□□□□ -0.58
LINC00339-213ENST00000642137 ZNF155Q12901 538 aaPredicted RBP11.4□□□□□ -0.58
LINC00339-213ENST00000642137 SELPLGQ14242 412 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 CYP27C1Q4G0S4 372 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 LACTB2Q53H82 288 aaPredicted RBP11.4□□□□□ -0.58
LINC00339-213ENST00000642137 COX20Q5RI15 118 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.4□□□□□ -0.58
LINC00339-213ENST00000642137 TCTN3Q6NUS6 607 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 SLC44A2Q8IWA5 706 aaPredicted RBP11.4□□□□□ -0.58
LINC00339-213ENST00000642137 SLC5A8Q8N695 610 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 HORMAD2Q8N7B1 307 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 PNPT1Q8TCS8 783 aaKnown RBP11.4□□□□□ -0.58
LINC00339-213ENST00000642137 XAGE5Q8WWM1 108 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 ZNF354BQ96LW1 612 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 ECSITQ9BQ95 431 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 BTBD10Q9BSF8 475 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 SERHL2Q9H4I8 314 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 IKZF5Q9H5V7 419 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 CDCP1Q9H5V8 836 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 Q9N2J8 555 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 EXD2Q9NVH0 621 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 CMTM6Q9NX76 183 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 TMEM181Q9P2C4 612 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 ABCD2Q9UBJ2 740 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 YARS2Q9Y2Z4 477 aaKnown RBP11.4□□□□□ -0.58
LINC00339-213ENST00000642137 KCNMB2Q9Y691 235 aa11.4□□□□□ -0.58
LINC00339-213ENST00000642137 A8MUI8 341 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 HMGN4O00479 90 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms