RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PCDHGB4Q9UN71 923 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 OSGIN2Q9Y236 505 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 FARSAQ9Y285 508 aaKnown RBP8.75□□□□□ -1.01
PHGDH-228ENST00000641847 KLF2Q9Y5W3 355 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-228ENST00000641847 SNX8Q9Y5X2 465 aa8.75□□□□□ -1.01
PHGDH-228ENST00000641847 KLF7O75840 302 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-228ENST00000641847 SLITRK5O94991 958 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 IFNA16P05015 189 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 ATP1B1P05026 303 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 UMODP07911 640 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 KRT16P08779 473 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 CD63P08962 238 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 HOXB9P17482 250 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-228ENST00000641847 TNNI3P19429 210 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 PTPN6P29350 595 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 CHI3L1P36222 383 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-228ENST00000641847 CPOXP36551 454 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 MC3RP41968 323 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 PSME3P61289 254 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 NCALDP61601 193 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 RPS18P62269 152 aaKnown RBP8.74□□□□□ -1.01
PHGDH-228ENST00000641847 MRPS35P82673 323 aaKnown RBP8.74□□□□□ -1.01
PHGDH-228ENST00000641847 SLC25A3Q00325 362 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 BIKQ13323 160 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 ELAVL1Q15717 326 aaKnown RBP8.74□□□□□ -1.01
PHGDH-228ENST00000641847 NSDHLQ15738 373 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 C16orf89Q6UX73 402 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 DLEU7Q6UYE1 221 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 TMEM64Q6YI46 380 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 DGAT2L6Q6ZPD8 337 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 ZNF621Q6ZSS3 439 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 ANKRD37Q7Z713 158 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 YTHDF3Q7Z739 585 aaKnown RBP8.74□□□□□ -1.01
PHGDH-228ENST00000641847 GALNT12Q8IXK2 581 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 TRIML2Q8N7C3 387 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 ADCY4Q8NFM4 1077 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 OR5AK3PQ8NH89 298 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 DNAJB8Q8NHS0 232 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 GOT1L1Q8NHS2 421 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-228ENST00000641847 PSMA8Q8TAA3 256 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 ZNF675Q8TD23 568 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 DOK4Q8TEW6 326 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 METTL21AQ8WXB1 218 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 KAT2AQ92830 837 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 LRRC58Q96CX6 371 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 CPPED1Q9BRF8 314 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-228ENST00000641847 NUDT9Q9BW91 350 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 ADAP2Q9NPF8 381 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 PNO1Q9NRX1 252 aaKnown RBP8.74□□□□□ -1.01
PHGDH-228ENST00000641847 SEMA3GQ9NS98 782 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 NDE1Q9NXR1 346 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 SLC25A37Q9NYZ2 338 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 MAT2BQ9NZL9 334 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 C19orf25Q9UFG5 118 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-228ENST00000641847 TCFL5Q9UL49 500 aa8.74□□□□□ -1.01
PHGDH-228ENST00000641847 MED13LQ71F56 2210 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 CROCCQ5TZA2 2017 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 TRBV5-3A0A0A0MS03 114 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 IGHV3-20A0A0C4DH32 117 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 A8MUA0 341 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 C17orf105B2RV13 164 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 DYRK3O43781 588 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 NPPAP01160 153 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 CT62P0C5K7 136 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 ZCCHC18P0CG32 403 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 UQCRC2P22695 453 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 SSTR2P30874 369 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 GALNSP34059 522 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 OR4D2P58180 307 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 MTPNP58546 118 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 EEF1A2Q05639 463 aaKnown RBP8.73□□□□□ -1.01
PHGDH-228ENST00000641847 TP53BP2Q13625 1128 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 IL10RAQ13651 578 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 PRICKLE4Q2TBC4 344 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 DNAL1Q4LDG9 190 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 SFT2D3Q587I9 215 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 C8orf82Q6P1X6 216 aaPredicted RBP8.73□□□□□ -1.01
PHGDH-228ENST00000641847 FAM111BQ6SJ93 734 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 ANGPTL8Q6UXH0 198 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 ZNF771Q7L3S4 317 aaPredicted RBP8.73□□□□□ -1.01
PHGDH-228ENST00000641847 PGAM4Q8N0Y7 254 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 VWA5B2Q8N398 1253 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 ZADH2Q8N4Q0 377 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 C7orf57Q8NEG2 295 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 OR7G2Q8NG99 324 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 OR56A1Q8NGH5 318 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 PNPT1Q8TCS8 783 aaKnown RBP8.73□□□□□ -1.01
PHGDH-228ENST00000641847 SFXN5Q8TD22 340 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 RIT1Q92963 219 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 MOAP1Q96BY2 351 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 SLC7A6OSQ96CW6 309 aaPredicted RBP8.73□□□□□ -1.01
PHGDH-228ENST00000641847 ELP4Q96EB1 424 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 FAM120BQ96EK7 910 aaKnown RBP8.73□□□□□ -1.01
PHGDH-228ENST00000641847 AURKBQ96GD4 344 aaPredicted RBP8.73□□□□□ -1.01
PHGDH-228ENST00000641847 RBM18Q96H35 190 aaKnown RBP8.73□□□□□ -1.01
PHGDH-228ENST00000641847 MAGED4Q96JG8 741 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 ANKRD27Q96NW4 1050 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 CGREF1Q99674 301 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 MESP1Q9BRJ9 268 aa8.73□□□□□ -1.01
PHGDH-228ENST00000641847 GPATCH1Q9BRR8 931 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms