RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 SLCO1B7G3V0H7 640 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 DNASE1L1P49184 302 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 MANFP55145 182 aaKnown RBP24.54■■□□□ 1.52
VEGFA-231ENST00000640499 WNT3P56703 355 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 PHC1P78364 1004 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 ALDH6A1Q02252 535 aaKnown RBP24.54■■□□□ 1.52
VEGFA-231ENST00000640499 MLC1Q15049 377 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 CLEC18BQ6UXF7 455 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 WDR53Q7Z5U6 358 aaPredicted RBP24.54■■□□□ 1.52
VEGFA-231ENST00000640499 DND1Q8IYX4 353 aaKnown RBP24.54■■□□□ 1.52
VEGFA-231ENST00000640499 FAM98AQ8NCA5 519 aaKnown RBP24.54■■□□□ 1.52
VEGFA-231ENST00000640499 CLEC18CQ8NCF0 446 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 FAM13CQ8NE31 585 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 HGDQ93099 445 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 OMA1Q96E52 524 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 HSPBAP1Q96EW2 488 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 TEX37Q96LM6 180 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 SACM1LQ9NTJ5 587 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 TAS2R9Q9NYW1 312 aa24.54■■□□□ 1.52
VEGFA-231ENST00000640499 NUP214P35658 2090 aaPredicted RBP24.54■■□□□ 1.52
VEGFA-231ENST00000640499 GIMAP1-GIMAP5A0A087WTJ2 511 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 NPIPA5E9PKD4 350 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 ACOX3O15254 700 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 ERN1O75460 977 aaKnown RBP24.53■■□□□ 1.52
VEGFA-231ENST00000640499 GLSO94925 669 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-231ENST00000640499 NAGAP17050 411 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 RPL3P39023 403 aaKnown RBP24.53■■□□□ 1.52
VEGFA-231ENST00000640499 KCNK10P57789 538 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 PRAMEF20Q5VT98 475 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 BICRALQ6AI39 1079 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 FBXW8Q8N3Y1 598 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 SPPL2AQ8TCT8 520 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 HOXB13Q92826 284 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-231ENST00000640499 GIMAP5Q96F15 307 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 OR52B2Q96RD2 323 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 CLMPQ9H6B4 373 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 DDX18Q9NVP1 670 aaKnown RBP24.53■■□□□ 1.52
VEGFA-231ENST00000640499 AIG1Q9NVV5 245 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 TUBA8Q9NY65 449 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-231ENST00000640499 NPIPA1Q9UND3 350 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 USH1CQ9Y6N9 552 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 NINQ8N4C6 2090 aa24.53■■□□□ 1.52
VEGFA-231ENST00000640499 A0A1W2PRB8 838 aa24.52■■□□□ 1.52
VEGFA-231ENST00000640499 PPM1BO75688 479 aa24.52■■□□□ 1.52
VEGFA-231ENST00000640499 MAP3K8P41279 467 aa24.52■■□□□ 1.52
VEGFA-231ENST00000640499 NRG3P56975 720 aa24.52■■□□□ 1.52
VEGFA-231ENST00000640499 RPS6KA2Q15349 733 aa24.52■■□□□ 1.52
VEGFA-231ENST00000640499 CHERPQ8IWX8 916 aaKnown RBP24.52■■□□□ 1.52
VEGFA-231ENST00000640499 POGLUT1Q8NBL1 392 aa24.52■■□□□ 1.52
VEGFA-231ENST00000640499 ZFP28Q8NHY6 868 aa24.52■■□□□ 1.52
VEGFA-231ENST00000640499 PSMA8Q8TAA3 256 aa24.52■■□□□ 1.52
VEGFA-231ENST00000640499 TMBIM1Q969X1 311 aa24.52■■□□□ 1.52
VEGFA-231ENST00000640499 GPR137Q96N19 417 aa24.52■■□□□ 1.52
VEGFA-231ENST00000640499 FAM173AQ9BQD7 235 aa24.52■■□□□ 1.52
VEGFA-231ENST00000640499 GPR45Q9Y5Y3 372 aa24.52■■□□□ 1.52
VEGFA-231ENST00000640499 SCN2BO60939 215 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 COQ9O75208 318 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 UGT2B11O75310 529 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 P04436 131 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 ZNF24P17028 368 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 GPC1P35052 558 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 TMEM198Q66K66 360 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 EPGNQ6UW88 154 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 FAM47EQ6ZV65 393 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 SPATA19Q7Z5L4 167 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 SLC44A2Q8IWA5 706 aaPredicted RBP24.51■■□□□ 1.51
VEGFA-231ENST00000640499 SLC34A3Q8N130 599 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 OR52N2Q8NGI0 321 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 ACTRT2Q8TDY3 377 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 OR5P2Q8WZ92 322 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 MAGEB18Q96M61 343 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 NODALQ96S42 347 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 LMF2Q9BU23 707 aaKnown RBP24.51■■□□□ 1.51
VEGFA-231ENST00000640499 DUSP26Q9BV47 211 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 BHLHE41Q9C0J9 482 aaPredicted RBP24.51■■□□□ 1.51
VEGFA-231ENST00000640499 CNIH4Q9P003 139 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 HIVEP3Q5T1R4 2406 aa24.51■■□□□ 1.51
VEGFA-231ENST00000640499 ZNHIT1O43257 154 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 TSPAN2O60636 221 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 UNC5CO95185 931 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 C6orf47O95873 294 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 IL12AP29459 219 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 NME5P56597 212 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 UFM1P61960 85 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 ZNF155Q12901 538 aaPredicted RBP24.5■■□□□ 1.51
VEGFA-231ENST00000640499 GAB1Q13480 694 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 PGS1Q32NB8 556 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 CMPK2Q5EBM0 449 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 EXOSC6Q5RKV6 272 aaKnown RBP24.5■■□□□ 1.51
VEGFA-231ENST00000640499 OR4F3Q6IEY1 312 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 PRR7Q8TB68 274 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 DYDC1Q8WWB3 177 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 PRPF18Q99633 342 aaKnown RBP24.5■■□□□ 1.51
VEGFA-231ENST00000640499 TTTY12Q9BZ98 90 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 DPY30Q9C005 99 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 CXorf36Q9H7Y0 433 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 SEC14L3Q9UDX4 400 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 NCKAP5O14513 1909 aa24.5■■□□□ 1.51
VEGFA-231ENST00000640499 ANKRD33BA6NCL7 494 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 LRRC3CA6NJW4 275 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms