RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 MALRD1Q5VYJ5 2156 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 IGLON5A6NGN9 336 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 DUSP11O75319 330 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 MT-ND2P03891 347 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 HMBSP08397 361 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 PNMTP11086 282 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 BCKDHAP12694 445 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 VCLP18206 1134 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 RPL9P32969 192 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 KIR2DS4P43632 304 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 LHX2P50458 406 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ATXN3P54252 364 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ADARP55265 1226 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 CDKL1Q00532 357 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 DDX10Q13206 875 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 DOC2AQ14183 400 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 FRG1Q14331 258 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 PKN2Q16513 984 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 IRAK1BP1Q5VVH5 260 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 IKBIPQ70UQ0 350 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 TLK2Q86UE8 772 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 SLC25A42Q86VD7 318 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 DNAAF5Q86Y56 855 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 SKA3Q8IX90 412 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 UBALD2Q8IYN6 164 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 MDS2Q8NDY4 140 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 OR13C3Q8NGS6 347 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 TEKT4Q8WW24 435 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 MR1Q95460 341 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF597Q96LX8 424 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 CCDC3Q9BQI4 270 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 NUP85Q9BW27 656 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 CCDC68Q9H2F9 335 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 TPK1Q9H3S4 243 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 NXF3Q9H4D5 531 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 SAMSN1Q9NSI8 373 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 AASSQ9UDR5 926 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 GTF3C4Q9UKN8 822 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 UBQLN1Q9UMX0 589 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 GPR34Q9UPC5 381 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 SATB2Q9UPW6 733 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 CHKBQ9Y259 395 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 AKNAQ7Z591 1439 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ADGRB2O60241 1585 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 SHROOM3Q8TF72 1996 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 PLA2R1Q13018 1463 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 GBF1Q92538 1859 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 DISP1Q96F81 1524 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 TET3O43151 1660 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 TRGV8A0A0C4DH27 118 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 OR5H15A6NDH6 313 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 H0YIG0 161 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ACSL3O95573 720 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ADCY5O95622 1261 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 H2BFMP0C1H6 154 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 RNASE2P10153 161 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ODC1P11926 461 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 MUC1P15941 1255 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 EEF1B2P24534 225 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 COILP38432 576 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 PDX1P52945 283 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 EMX1Q04741 257 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 PHLDA2Q53GA4 152 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 LCN1P1Q5VSP4 162 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 MKXQ8IYA7 352 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF100Q8IYN0 542 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 C15orf54Q8N8G6 183 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 LRTM2Q8N967 370 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 LIPHQ8WWY8 451 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF486Q96H40 463 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 PAFAH2Q99487 392 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF416Q9BWM5 594 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ALG9Q9H6U8 611 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 DMAP1Q9NPF5 467 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 PPANQ9NQ55 473 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 MEPEQ9NQ76 525 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 OLA1Q9NTK5 396 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 KLHL21Q9UJP4 597 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 NOCTQ9UK39 431 aaKnown RBP-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 ERVW-1Q9UQF0 538 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 UBIAD1Q9Y5Z9 338 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 RFNGQ9Y644 331 aa-0.2□□□□□ -2.44
CCDC7-215ENST00000639629 SPTBN5Q9NRC6 3674 aaKnown RBP-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 DENND4AQ7Z401 1863 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 RELNP78509 3460 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 VPS13CQ709C8 3753 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 IGKV3D-11A0A0A0MRZ8 115 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 ARPC4-TTLL3A0A0A6YYG9 625 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF487B1APH4 448 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 E9PAM4 449 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 NPIPA2E9PIF3 369 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 H7C0S8 307 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 SAP18O00422 153 aaKnown RBP-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF195O14628 629 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 BUB1O43683 1085 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 TRAF3IP2O43734 574 aaPredicted RBP-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 NME2P1O60361 137 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 ZCCHC18P0CG32 403 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 CYP11B1P15538 503 aa-0.21□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF44P15621 663 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms