RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 EEF1E1O43324 174 aaKnown RBP11.35□□□□□ -0.59
CAPN3-221ENST00000638141 KDM4BO94953 1096 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 GADD45GO95257 159 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 B3GALT4O96024 378 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 GASTP01350 101 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 HEXAP06865 529 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 EPB42P16452 691 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 MTNR1BP49286 362 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 HMGCS2P54868 508 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 SEC61A1P61619 476 aaKnown RBP11.35□□□□□ -0.59
CAPN3-221ENST00000638141 RAB40BQ12829 278 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 WSCD1Q658N2 575 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 FUT10Q6P4F1 479 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 TMUB2Q71RG4 321 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 DNAJB7Q7Z6W7 309 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-221ENST00000638141 ARMC10Q8N2F6 343 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 SVBPQ8N300 66 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 TOMM5Q8N4H5 51 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF527Q8NB42 609 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 PXT1Q8NFP0 134 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 GTF3C2Q8WUA4 911 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-221ENST00000638141 MTFMTQ96DP5 389 aaKnown RBP11.35□□□□□ -0.59
CAPN3-221ENST00000638141 CAPNS2Q96L46 248 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 CPEB1Q9BZB8 566 aaKnown RBP11.35□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF334Q9HCZ1 680 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-221ENST00000638141 EXOSC3Q9NQT5 275 aaKnown RBP11.35□□□□□ -0.59
CAPN3-221ENST00000638141 NANSQ9NR45 359 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 ACAD8Q9UKU7 415 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 CLCA2Q9UQC9 943 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 HS3ST4Q9Y661 456 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 ENPP4Q9Y6X5 453 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 MCM3APO60318 1980 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 EFCAB7A8K855 629 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 H7C0S8 307 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 FFAR3O14843 346 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 SCAMP1O15126 338 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 GPR42O15529 346 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 PRAMEF2O60811 474 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 CLDN9O95484 217 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 HPXP02790 462 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 FOLR2P14207 255 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 CHI3L1P36222 383 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-221ENST00000638141 SPAM1P38567 509 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 VEGFBP49765 207 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 MMP15P51511 669 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF155Q12901 538 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-221ENST00000638141 PAN3Q58A45 887 aaKnown RBP11.35□□□□□ -0.59
CAPN3-221ENST00000638141 SPOUT1Q5T280 376 aaKnown RBP11.35□□□□□ -0.59
CAPN3-221ENST00000638141 AVPI1Q5T686 147 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 GSG1LQ6UXU4 331 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF621Q6ZSS3 439 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 PLEKHH3Q7Z736 793 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 MARCH9Q86YJ5 346 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 GPR135Q8IZ08 494 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 CPXM2Q8N436 756 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 PCED1BQ96HM7 432 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 SEMA3CQ99985 751 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 IFT27Q9BW83 186 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 PAPOLGQ9BWT3 736 aaKnown RBP11.35□□□□□ -0.59
CAPN3-221ENST00000638141 ZYG11BQ9C0D3 744 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 P2RY12Q9H244 342 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 SLC6A20Q9NP91 592 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 PLSCR2Q9NRY7 297 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 FZD4Q9ULV1 537 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 PCDHB7Q9Y5E2 793 aa11.35□□□□□ -0.59
CAPN3-221ENST00000638141 NUP214P35658 2090 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-221ENST00000638141 C1orf226A1L170 272 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 PRAMEF25A6NGN4 478 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF729A6NN14 1252 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-221ENST00000638141 POM121CA8CG34 1229 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 GABRPO00591 440 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 SNTB1Q13884 538 aaKnown RBP11.34□□□□□ -0.59
CAPN3-221ENST00000638141 RGNQ15493 299 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 GUCA2BQ16661 112 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 XKR6Q5GH73 641 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 FAM69AQ5T7M9 428 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 KIAA1211LQ6NV74 962 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 UNC5DQ6UXZ4 953 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 LBX2Q6XYB7 198 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 BEND4Q6ZU67 534 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF683Q8IZ20 524 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 HUS1BQ8NHY5 278 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 FGF11Q92914 225 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 TSSK3Q96PN8 268 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 KLHL5Q96PQ7 755 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 DMRTA2Q96SC8 542 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 MTG2Q9H4K7 406 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 WWOXQ9NZC7 414 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 OR6C2Q9NZP2 312 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 BACE2Q9Y5Z0 518 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 SHISA3A0PJX4 238 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 UBE2CO00762 179 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 PRRG1O14668 218 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 GSTZ1O43708 216 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-221ENST00000638141 C1QCP02747 245 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 HIST1H2ABP04908 130 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 ZNF806P0C7X5 589 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 POU2F1P14859 743 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 PTAFRP25105 342 aa11.34□□□□□ -0.59
CAPN3-221ENST00000638141 PCSK1P29120 753 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms