RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ANGPTL4Q9BY76 406 aa12.66□□□□□ -0.38
PNKP-228ENST00000637325 STMN4Q9H169 189 aaPredicted RBP12.66□□□□□ -0.38
PNKP-228ENST00000637325 ANKRA2Q9H9E1 313 aa12.66□□□□□ -0.38
PNKP-228ENST00000637325 TAS2R9Q9NYW1 312 aa12.66□□□□□ -0.38
PNKP-228ENST00000637325 HRH3Q9Y5N1 445 aa12.66□□□□□ -0.38
PNKP-228ENST00000637325 PTGDR2Q9Y5Y4 395 aa12.66□□□□□ -0.38
PNKP-228ENST00000637325 MYO1GB0I1T2 1018 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 ESPNB1AK53 854 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 RGS16O15492 202 aaPredicted RBP12.65□□□□□ -0.38
PNKP-228ENST00000637325 PLOD3O60568 738 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 COQ9O75208 318 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 ERN1O75460 977 aaKnown RBP12.65□□□□□ -0.38
PNKP-228ENST00000637325 LINC00032P0C843 101 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 COX6B1P14854 86 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 PRPH2P23942 346 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 ACVR2AP27037 513 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 SOX18P35713 384 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 TRPC1P48995 793 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 PMPCAQ10713 525 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 CEBPEQ15744 281 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 ARL13AQ5H913 290 aaPredicted RBP12.65□□□□□ -0.38
PNKP-228ENST00000637325 EMC4Q5J8M3 183 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 SLC30A6Q6NXT4 461 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 ACAD11Q709F0 780 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 CLYBLQ8N0X4 340 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 MREGQ8N565 214 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 OR10Q1Q8NGQ4 319 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 PPP1R14CQ8TAE6 165 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 ASB5Q8WWX0 329 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 TMBIM1Q969X1 311 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 TMEM109Q9BVC6 243 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 SLC6A15Q9H2J7 730 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 FOLH1BQ9HBA9 442 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 ACKR4Q9NPB9 350 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 KLRF1Q9NZS2 232 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 TNFRSF10DQ9UBN6 386 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 GPR55Q9Y2T6 319 aaPredicted RBP12.65□□□□□ -0.38
PNKP-228ENST00000637325 TRAF6Q9Y4K3 522 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 CCL27Q9Y4X3 112 aa12.65□□□□□ -0.38
PNKP-228ENST00000637325 DOCK7Q96N67 2140 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 C15orf38-AP3S2A0A0A6YYH1 394 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 GNB5O14775 395 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 TO15178 435 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 CTIFO43310 598 aaKnown RBP12.64□□□□□ -0.39
PNKP-228ENST00000637325 WDR1O75083 606 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 SLITRK5O94991 958 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 CHRNGP07510 517 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 SNRPB2P08579 225 aaKnown RBP12.64□□□□□ -0.39
PNKP-228ENST00000637325 FGF4P08620 206 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 CREB1P16220 341 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 IL12BP29460 328 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 NUP107P57740 925 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 RPL38P63173 70 aaKnown RBP12.64□□□□□ -0.39
PNKP-228ENST00000637325 PSPHP78330 225 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 ZNF155Q12901 538 aaPredicted RBP12.64□□□□□ -0.39
PNKP-228ENST00000637325 KIAA0040Q15053 153 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 GALNTL6Q49A17 601 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 SH2D4BQ5SQS7 431 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 KANK2Q63ZY3 851 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 TMEM107Q6UX40 140 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 ANGPTL8Q6UXH0 198 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 B3GNT6Q6ZMB0 384 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 Q6ZSR9 355 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 ZCCHC23Q6ZST2 131 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 MARVELD2Q8N4S9 558 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 OR7G2Q8NG99 324 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 OR1J4Q8NGS1 313 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 NEIL3Q8TAT5 605 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.64□□□□□ -0.39
PNKP-228ENST00000637325 AGR3Q8TD06 166 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 TWIST2Q8WVJ9 160 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 HGDQ93099 445 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 GFM2Q969S9 779 aaKnown RBP12.64□□□□□ -0.39
PNKP-228ENST00000637325 TMCO6Q96DC7 493 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 TMEM41AQ96HV5 264 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 COL21A1Q96P44 957 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 GNRHR2Q96P88 292 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 BTBD9Q96Q07 612 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 NODALQ96S42 347 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 OSBPL11Q9BXB4 747 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 CENPHQ9H3R5 247 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 TAS2R7Q9NYW3 318 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 SPRR3Q9UBC9 169 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 RNF6Q9Y252 685 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 OR10H1Q9Y4A9 318 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 DNAJC15Q9Y5T4 150 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 TEX15Q9BXT5 2789 aa12.64□□□□□ -0.39
PNKP-228ENST00000637325 ABCA12Q86UK0 2595 aa12.63□□□□□ -0.39
PNKP-228ENST00000637325 PRAMEF25A6NGN4 478 aa12.63□□□□□ -0.39
PNKP-228ENST00000637325 OR6C70A6NIJ9 312 aa12.63□□□□□ -0.39
PNKP-228ENST00000637325 NPIPB8E9PQR5 432 aa12.63□□□□□ -0.39
PNKP-228ENST00000637325 AKAP10O43572 662 aa12.63□□□□□ -0.39
PNKP-228ENST00000637325 ABCB7O75027 752 aa12.63□□□□□ -0.39
PNKP-228ENST00000637325 ICOSLGO75144 302 aa12.63□□□□□ -0.39
PNKP-228ENST00000637325 UGT2B11O75310 529 aa12.63□□□□□ -0.39
PNKP-228ENST00000637325 NME6O75414 186 aaPredicted RBP12.63□□□□□ -0.39
PNKP-228ENST00000637325 CT45A8P0DMV1 189 aa12.63□□□□□ -0.39
PNKP-228ENST00000637325 CT45A9P0DMV2 189 aa12.63□□□□□ -0.39
PNKP-228ENST00000637325 GABRA1P14867 456 aa12.63□□□□□ -0.39
PNKP-228ENST00000637325 TACR1P25103 407 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms