RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 CTHRC1Q96CG8 243 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 APIPQ96GX9 242 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 UBQLN3Q9H347 655 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 PPCSQ9HAB8 311 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 EHD3Q9NZN3 535 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 HEY2Q9UBP5 337 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 ZNF639Q9UID6 485 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 SLC6A5Q9Y345 797 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 TIMM22Q9Y584 194 aa16.39■□□□□ 0.21
PNKP-225ENST00000636214 DRD5P21918 477 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 MPIP34949 423 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 CCT5P48643 541 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 KRTAP10-9P60411 292 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 MRPS22P82650 360 aaKnown RBP16.38■□□□□ 0.21
PNKP-225ENST00000636214 DUSP2Q05923 314 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 ZNF763Q0D2J5 394 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 RCAN2Q14206 197 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 CCDC153Q494R4 210 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 ACSF3Q4G176 576 aaPredicted RBP16.38■□□□□ 0.21
PNKP-225ENST00000636214 FAM219BQ5XKK7 198 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 TMEM81Q6P7N7 255 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 GSPT2Q8IYD1 628 aaKnown RBP16.38■□□□□ 0.21
PNKP-225ENST00000636214 OR9A2Q8NGT5 310 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 KAT2AQ92830 837 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 HGDQ93099 445 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 ABTB1Q969K4 478 aaPredicted RBP16.38■□□□□ 0.21
PNKP-225ENST00000636214 ZNF681Q96N22 645 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 COL21A1Q96P44 957 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 KCNA7Q96RP8 456 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 TIMP4Q99727 224 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 MIEF1Q9NQG6 463 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 SLC35C2Q9NQQ7 365 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 CSMD2Q7Z408 3487 aa16.38■□□□□ 0.21
PNKP-225ENST00000636214 SNPHO15079 494 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 TO15178 435 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 ICOSLGO75144 302 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 EPPINO95925 133 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 BMP5P22003 454 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 PTPN6P29350 595 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 NTSP30990 170 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 UQCRC1P31930 480 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 EMDP50402 254 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 EFR3AQ14156 821 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 EIPR1Q53HC9 387 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 ZNF628Q5EBL2 1059 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 WIPI1Q5MNZ9 446 aaPredicted RBP16.37■□□□□ 0.21
PNKP-225ENST00000636214 SCIMPQ6UWF3 145 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 ZYG11AQ6WRX3 759 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 FAM83FQ8NEG4 500 aaPredicted RBP16.37■□□□□ 0.21
PNKP-225ENST00000636214 OR14L1PQ8NHC6 308 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 TMBIM1Q969X1 311 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 NODALQ96S42 347 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 UGT2B28Q9BY64 529 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 PRDM14Q9GZV8 571 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 STMN4Q9H169 189 aaPredicted RBP16.37■□□□□ 0.21
PNKP-225ENST00000636214 GSTO2Q9H4Y5 243 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 RRAGDQ9NQL2 400 aaPredicted RBP16.37■□□□□ 0.21
PNKP-225ENST00000636214 TAS2R9Q9NYW1 312 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 MID2Q9UJV3 735 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 GRID1Q9ULK0 1009 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 MAPRE3Q9UPY8 281 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 OR10H1Q9Y4A9 318 aa16.37■□□□□ 0.21
PNKP-225ENST00000636214 MED12Q93074 2177 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 OR6C70A6NIJ9 312 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 SMIM23A6NLE4 172 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 COPEO14579 308 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 COQ9O75208 318 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 UGT2B11O75310 529 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 ERN1O75460 977 aaKnown RBP16.36■□□□□ 0.21
PNKP-225ENST00000636214 CBR3O75828 277 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 ACTL6AO96019 429 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 BMP7P18075 431 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 SLCO1A2P46721 670 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 ASCL1P50553 236 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 RAE1P78406 368 aaKnown RBP16.36■□□□□ 0.21
PNKP-225ENST00000636214 C2orf80Q0P641 193 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 ZNF155Q12901 538 aaPredicted RBP16.36■□□□□ 0.21
PNKP-225ENST00000636214 NHSL2Q5HYW2 709 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 FNDC7Q5VTL7 733 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 VASNQ6EMK4 673 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 GALNT18Q6P9A2 607 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 ENPP6Q6UWR7 440 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 ARSKQ6UWY0 536 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 LARP4Q71RC2 724 aaKnown RBP eCLIP16.36■□□□□ 0.21
PNKP-225ENST00000636214 YRDCQ86U90 279 aaKnown RBP16.36■□□□□ 0.21
PNKP-225ENST00000636214 LIX1LQ8IVB5 337 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 BTBD9Q96Q07 612 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 TRIB1Q96RU8 372 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 TXLNGYQ9BZA5 131 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 GALNT9Q9HCQ5 603 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 SERHLQ9NQF3 203 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 DKKL1Q9UK85 242 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 EXO1Q9UQ84 846 aaKnown RBP16.36■□□□□ 0.21
PNKP-225ENST00000636214 GPR55Q9Y2T6 319 aaPredicted RBP16.36■□□□□ 0.21
PNKP-225ENST00000636214 AKAP6Q13023 2319 aa16.36■□□□□ 0.21
PNKP-225ENST00000636214 SERTM1A2A2V5 107 aa16.35■□□□□ 0.21
PNKP-225ENST00000636214 CYP4B1P13584 511 aa16.35■□□□□ 0.21
PNKP-225ENST00000636214 DDCP20711 480 aa16.35■□□□□ 0.21
PNKP-225ENST00000636214 TIMP3P35625 211 aa16.35■□□□□ 0.21
PNKP-225ENST00000636214 KIR2DL3P43628 341 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms